KEGG   Acipenser ruthenus (sterlet): 117429244
Entry
117429244         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117429244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arut03400]
    117429244
Enzymes [BR:arut01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     117429244
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117429244
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C mRNA_cap_enzyme BRCT_2 Med3
Other DBs
NCBI-GeneID: 117429244
NCBI-ProteinID: XP_034762928
LinkDB
Position
27:8288959..8313751
AA seq 918 aa
MAEQRFCVEYAKRGTAGCKKCKDKIMKGLVRIGKVVPNPFTESGGDMKEWYHVKCIFEKF
EKARATTKKIEDITDLEGWEELQDEEKELINKHISDLAAKAAASPKKKVQAKLSPGGQLT
SPSTQLTSPSPRKFSGFSATKPGPSSPAPATQGSKLSAQYCDPTHKDCLFREFRKLCAMV
ADKPSYNVKTQIIQDFLRRGSAGDGFHGDLFLTVKLLLPGVIKSVYNLNDKQIVKLFSRI
FNCNQEEMVRDLEQGDVSETIRMFFEGSTSFPPPSKSLLTIQEVDTFLERLSQLTKEDEQ
QKELEDISRKCTANDLKCIIRLIKHDLKMNSGAKHVLDAVDPNAYDAFKASRNLGDVIDR
VLRNQHEAASSSGPRKILSVEASLMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGER
AGAXEHFSYFSRSLKPVLPHKVVHFKEFIPQAFPGGNSIILDAEVLLIDTSTSKPLPFGS
LGVHKKAAFQDAKVCLFVFDCIFFNGVSLMDRPLRERKKFLHENMVEIPNRILFSEMKHV
TRAADLADMITRVIREGLEGLVLKDVKGLYEPGKRHWLKVKKDYLNEGAMADTADLVVLG
AFYGTGSKGGMMSVFLMGCYDPASQMWCTVTKCAGGHDDATLARLQSELDMVKISKEPSK
IPGWLKINKNYYPDFVARDPKKAAVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDW
QSATNLPQLRELFRLSKETSDFEVTAGPSKSSSGRESVGSTPPSTSTASSSKLTAASSNS
TPRVPPPVKIENPSAGKAVKRKQPAEEKHTKKLKKSETLQSNGQSKVKAESSQPIAPTQE
KTLLDIFTGVKLYLPDSVQDFGKLRRYFVAYNGDLVPEYDAAMATHSVGELGEASEAKRV
TTHWIWECIRRRRVVPPC
NT seq 2757 nt   +upstreamnt  +downstreamnt
atggctgaacagaggttctgtgtggaatatgccaagcgaggcacagccggctgtaagaag
tgcaaggataagattatgaaggggctggtacgtattggtaaggtggtccccaatcccttc
actgaatccgggggtgatatgaaggagtggtaccacgtcaagtgcatctttgaaaagttt
gagaaggctcgggctaccaccaagaaaatcgaggacattactgacctggagggctgggaa
gaactgcaggatgaggagaaggagctcatcaacaaacacatctcagacttggctgccaag
gctgctgctagccccaagaagaaggtccaggccaagctgagccctggtggccagttgacc
tccccctccacccaactgaccagcccctctccccgcaagttctcaggattctcagctacg
aagcctgggccctcaagtccggctcctgccacacagggcagtaagctctctgcacagtac
tgtgaccccacccataaggactgcctgttcagggagttccgtaagctgtgcgccatggtg
gctgacaagcccagttacaacgtcaagacccagatcatccaggacttcctgaggaggggc
tcggcgggagatggtttccatggagacctgttcctgacggtgaagctgctgcttcctgga
gtaatcaagagtgtttacaacctgaacgacaagcagattgtcaagctgttcagcagaatc
ttcaactgtaaccaggaagagatggtccgggaccttgagcagggcgatgtctcagagacg
attcgaatgttttttgaaggtagcacgtcttttcctccgccgtcgaagagcttgctgact
atccaggaggtggacacgttcctggagcgactgtctcaactcacgaaggaagacgagcag
cagaaagagctggaggacatctccaggaaatgcacagccaatgatctgaaatgcatcatc
cgactcattaagcacgatttgaaaatgaactctggagccaaacatgttctggatgcagtg
gaccccaatgcatatgatgccttcaaggcctcgcggaacctaggagacgtgatagacaga
gtcctgaggaaccagcatgaagctgcgagcagctctgggcctaggaagatcctgagtgtg
gaggcctcactcatgacccctgtgcagcccatgctggccgaggcatgcaagtcgatcgag
tatgccatgaagaagtgtcccaacgggatgtactccgagatcaagtacgacggagagcgc
gcaggtgcangggagcacttcagctacttcagccgcagcctgaaacctgtgctgccacac
aaagtggttcactttaaggagttcattccccaggccttccccggggggaacagcataatc
ctggatgcagaggtgctgctgatcgacaccagcaccagtaaaccactgccattcgggagc
ctgggggtgcataagaaagcagcctttcaagatgctaaggtctgcctgtttgtgttcgac
tgcatcttcttcaacggagtgagtctaatggacaggcctctgcgtgaacgaaagaagttt
cttcatgaaaacatggtggagatcccaaaccggattctcttctctgaaatgaagcatgtt
actagggctgctgatcttgctgacatgatcacacgggtgatccgagaaggcttggagggg
ctggtgctgaaggatgtcaagggtctctatgaacctgggaagaggcactggctgaaggtg
aagaaggactacctgaatgaaggagccatggcagatactgctgacctggtggtattgggg
gccttctatgggactggctccaagggcgggatgatgtcagttttcttgatgggttgctat
gatcctgcatcccaaatgtggtgcacggtgaccaagtgtgcgggcgggcacgacgatgcc
accctcgcacgactgcagagcgagctggacatggtgaagatcagcaaggaaccaagtaaa
atccccggctggttaaaaatcaacaaaaactactatccagatttcgtagctcgtgatccc
aagaaagctgcagtatgggagatcactggcgcagagttctccaaggcagaagctcacacc
gctgacggcatctccatccgattcccacgatgcacccgtatccgtgacgacaaggactgg
cagagcgcaaccaacctgccgcagctcagggagttgttccgcttatcgaaggagacatct
gatttcgaggtgaccgcgggcccttcgaagagctcctcagggagggagagtgtgggcagc
acccctccctccacctccactgccagctccagcaagctcaccgctgcaagcagcaacagc
accccgagagtgccccctcctgttaagattgagaacccttcagctgggaaagctgtcaag
aggaaacagcctgcagaggaaaagcacacaaagaagttgaaaaaatcagaaaccttgcaa
agcaatgggcaaagcaaagtgaaagccgagtcgtctcagcccatagcacccactcaggag
aagactctgcttgatatattcactggggtaaagctgtaccttccagactcggtccaggat
ttcggaaagctacgccgttattttgttgcctacaatggagacctggtgcctgaatacgat
gcagccatggcaacacacagtgtgggggagctgggcgaggcgtcggaggcgaagcgtgtc
accacacactggatctgggagtgtatcaggcggcgcagggtcgtgccaccttgctaa

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