Acipenser ruthenus (sterlet): 117429254
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Entry
117429254 CDS
T07327
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X2
KO
K08532
RAR-related orphan receptor alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117429254
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
arut03310
]
117429254
Transcription factors [BR:
arut03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117429254
Nuclear receptors [BR:
arut03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117429254
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117429254
NCBI-ProteinID:
XP_033904456
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Position
19:3117831..3359536
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AA seq
468 aa
AA seq
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MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPTYNLSTNGLTELHDDLSSYIDGHTPDGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFTAGSGFFPYCSFTNGDTSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQTFLQEETENYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVLVRMCRAFDSQNNTVYFDGKYAGPEVFKALGCDDLISSVFEFGKNLCSVHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHILQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFSSEFEQPMPIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaattattccgtgcaagatc
tgtggagataaatcatcaggaatccattatggggttataacttgtgaaggctgcaagggc
ttcttcaggagaagtcagcagagcaacgccacatactcctgtcctcgtcagaagaactgt
ctgatcgaccggaccagccgcaaccgctgccagcactgccgtctacagaagtgtctcact
gtgggaatgtcacgagatgccgtcaagtttggcagaatgtctaagaaacaacgagacagt
ctgtatgcggaagtgcagaagcatcgactgcaacagcagcagcgggatcaccaacagcag
cccggggaggctgagccactcacgcccacctacaacctctccaccaatgggctgacagag
ctgcacgatgacctcagcagctacattgatggccacaccccagacggcagcaaagcagac
tctgcagtcagcagcttctacctggatatccagccttcacctgaccagtctgggctggat
atcaacgggatcaaaccagaacccatctgtgacttcaccgcgggttctggtttctttccg
tactgctcgttcacaaatggggacacttctcccacagtgtcaatggcagagctagaacat
ttggcacagaatatctccaagtcacacatggaaacgtgtcagtacttgagagaggaacta
cagcaaatgacctggcagacattcctgcaggaagaaacggagaactaccagagcaagccc
cgggaggtcatgtggcagctgtgtgcaatcaaaatcacagaagctatccagtatgtggtg
gagtttgccaaacgcattgatggcttcatggagctgtgtcagaatgatcaaatagtgctt
cttaaagcaggttcattggaggttgtgttggtcagaatgtgccgtgcctttgactctcag
aacaacacagtgtattttgatggaaagtatgctggtccagaagttttcaaagcattaggc
tgtgatgacttgatcagctctgtctttgagtttggaaaaaacttgtgttctgtgcatctg
tctgaagacgagattgcgttgttctctgcgtttgtgttgatgtctgcagatcgatcctgg
cttcaagaaaaagtaaaggtagagaagcttcagcagaaaatccagctggctcttcaacac
atcctgcagaagaaccacagagaggatggaatactaacaaagttgatatgcaaagtgtca
acacttcgagcactgtgcagcagacatacagagaagctgactgcgttcaaagcaatatac
ccggacattgtgcgtgcccatttccctcctttatacaaggagctcttcagttcagagttc
gagcagccgatgcctattgatgggtaa
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