Acipenser ruthenus (sterlet): 117429319
Help
Entry
117429319 CDS
T07327
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117429319
Enzymes [BR:
arut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
117429319
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Other ribosome biogenesis factors
117429319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
DUF29
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
117429319
NCBI-ProteinID:
XP_033904563
LinkDB
All DBs
Position
27:complement(33027..38777)
Genome browser
AA seq
480 aa
AA seq
DB search
MVLYVKAAEILDKIENKEGAIKTLVYNSKFQNIKQLYALVCETLKYSKILEEIITSTGLL
KQNKLKMNVAKVLVYDLLIGRGVKCGGSWKALIMKHRARLQAALARLKIKRKVSRNEDLL
PKASQAQGKQPPRYARVNTLKTSQEDVIDYLKREGYTYLGRASSLAELQQLSGKRFYCDL
HLPGLLVFPAKTDLHAHFLYQAGHIILQDKASCLPAFLLNPPAGAHVIDACAAPGNKTSH
LAAVLGNRGKLFAFDLDPKRLSTMSTLLLRAGVTCHELANQDFLTLNPEDPKYSQVEYIL
LDPSCSGSGMVGRMNELTDSPGAVPAQRLQSLAAFQLRCLNHALCFPRLQRLIYSTCSVH
EEENEGVVRACLREHRRSFRLVPVLPSWPERGQAPLTQCLRASPGETLTNGFFVAMLERR
SPGEQEDELTSDEDVISFPANSDVEAESHDPSPLEAEPAPTASKKKRKKRKKKPKQQQEN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtacgtgaaagcagcggagatcctcgataagatcgagaacaaggagggcgct
attaagactctcgtgtataacagtaagtttcagaatatcaagcagctgtacgccttggtg
tgcgagacgctgaagtactccaagatcctggaggagatcatcaccagcacaggcctgctg
aagcagaacaaactcaagatgaacgtggccaaggtgctggtgtacgacctcctgattggc
aggggggtgaagtgtggggggagctggaaggctctgatcatgaagcaccgtgcgaggctg
caggcagccctggccaggctcaagatcaagaggaaggtcagccgcaacgaggacctgctc
cccaaagccagccaggctcaagggaagcagccgcctcgctacgctcgggtcaacactctc
aagaccagccaggaggacgtgatcgactacctgaagagagagggctacacctacctgggg
cgagcgagcagtctggcggagttgcagcagctgtcgggaaagcggttttattgtgacctg
catctcccaggactcctggtcttcccggccaagactgacctccacgcacactttctgtac
caggcgggacacatcattctgcaggacaaggccagctgcctcccagcgttcctcctgaac
ccccctgctggggcccatgtgattgatgcctgcgccgccccggggaacaagaccagccac
ctggccgctgtgctggggaaccgggggaagctgtttgccttcgaccttgaccccaagcgc
ctgtccactatgagcaccctgctcctcagagctggggtcacctgtcatgagctggccaat
caggacttcctgacgctgaacccagaggaccccaaatacagccaggtggagtatatcctg
ctggacccctcatgcagcggctcaggtatggtgggccgcatgaacgagctcacagactcc
cctggcgccgtgcctgcgcagcggctgcagtctctggctgcgttccagctgcgctgcctg
aaccacgccctgtgcttcccgcggctgcagcgcctcatctactccacctgctcggtgcac
gaggaggagaacgagggcgtggtgcgggcctgcctgcgggagcaccgccgcagcttcaga
ctggtccctgttctgccgagctggccggagcgaggtcaggcgcccctgactcagtgtctg
cgcgcaagccctggggagaccctcaccaacggcttcttcgtggccatgctagagaggagg
agccctggggagcaggaggatgagctaacttccgacgaagatgtgatatcatttcctgcc
aacagtgatgtggaagcagaatcacatgaccccagccccttggaggcagagcctgccccc
acagcttccaagaagaagagaaaaaagaggaagaagaaacccaagcagcagcaggagaat
tga
DBGET
integrated database retrieval system
