KEGG   Acipenser ruthenus (sterlet): 117429353
Entry
117429353         CDS       T07327                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117429353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117429353
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     117429353
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EML Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_EIPR1 eIF2A Tricorn_2nd Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st PROPPIN Ge1_WD40 Cytochrom_D1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_like WDR54 VPS8_N WD_LRWD1 Vgb_lyase Beta-prop_DCAF12 DUF2415 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 117429353
NCBI-ProteinID: XP_034757595
LinkDB
Position
19:complement(114567..122447)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGRSEKDGSDTIVTGSLDDTVKVWKWTDEKLELQWSL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLDSGKQIKSMDAGPVDAWTVAFSPDSKY
VATGSHLGKVNIFGVESGKKEFSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
GPDDTHFVSSSSDKSVKVWDTGSRACVHTFFDHQDQVWSVKYNGNGSKVVSAGDDREIHI
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacagtacagcatacttttcaagcaagaacatgctcatgatgatgctatttgg
actgcggcatgggggaggagtgagaaagatggctccgatactatagtgacagggtcattg
gatgacactgtaaaagtctggaagtggacagatgagaagctggagttacagtggtctctg
gaaggtcatcagcttggggtggtgtcggtggatataagccacaatggtgccattgcagcc
tccagttctttagatgcccacatacgtctctgggatttggattctggcaaacagataaag
tcaatggatgcaggaccagtggatgcttggaccgtggccttttctccagattccaagtac
gtggctacaggaagccatctggggaaagttaacatctttggcgtggagagcgggaagaag
gaattttctttggacactcgagggaaattcatccttagtattgcatatagcccagatggg
aagtatctggccagtggagctatagatggaatcattaatatttttgatattgctactgga
aaacttctccacacgttggaaggtcacgctatgccgattcgatccctgacattctcgcca
gattctcagcttttagtaacggcttcggatgatggctacatcaagatatatgatgtacaa
catgcaaaccttgctgggactttgagtggccatggatcttgggtattaaatgttgcattt
ggtccagatgacacccactttgtttcaagctcttctgacaagagtgtcaaagtgtgggat
actggctcaagagcatgcgtgcacacattctttgatcatcaagatcaggtgtggagcgtt
aaatacaatggaaatggttccaaggtcgtgtctgctggagatgatcgggaaatccacata
tacgactgtccagtttaa

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