Acipenser ruthenus (sterlet): 117429400
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Entry
117429400 CDS
T07327
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117429400
Enzymes [BR:
arut01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
117429400
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117429400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_33
AAA_lid_PRS2_C
AAA_14
AAA_25
AAA_7
RNA_helicase
Rad17
nSTAND3
bpMoxR
NTPase_1
TIP49
Mg_chelatase
ABC_tran
IstB_IS21
AAA_11
NACHT
AAA_19
AAA_18
KAP_NTPase
CDC48_N
Motif
Other DBs
NCBI-GeneID:
117429400
NCBI-ProteinID:
XP_033904717
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All DBs
Position
27:21545235..21550699
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AA seq
772 aa
AA seq
DB search
MEKFSENTDFIPYVVNAAMDEKSLKLLPLDTEDQGTQRCRLGPGTMASLGLKIGSLVQIS
LLGGHCLCTAWPRSDLAEGFMQFDSKCVTVELIGKTYNMCSVNLNQIKMVPCTKLKCIHV
KVFVKNVEFKKGATSALLHELVKEVLRNVYVSQSHVVSFASLEAPIELIEIQSLNPSTCE
AGRITAKTTIEITEVKRLESYMNQLKNSSKIPLGGMEDVCASLKEILNLPFHYPRTLQRL
GLSCPKGVLLVGPPGVGKTLLVRSVAREVCAHLVTISGPVILGSRPGESEENLRRIFQQT
KEASEDGPCVLFIDELDSLCPKRTGSTNATENRLVAQLLTLMDGIGSEGHMVIMAATNRP
DALDPALRRSGRFDREVIIGAPTLKQRKSILEMLSTQMPLCSDVDVAFLAEMTTGYVGAD
LTALCREAALQAILHTSQDAGSHLIRMSNFLEALKKVHPSCLRSSIGQTDFRPVAWEHIG
GLEDVKLKLKQSIEWPMKFPEAFIRLGLSRPKGVLLYGPPGCAKTTLVKAAATSCHCSFL
SVSGADLFSPYVGDSEKTLAQVFQQARACAPSVLFLDEIDSILGSRADSKASRGVQDRVL
SVILNELDGIGLKVTERRGPASKKCLQEGLPEQQECDRQLDYQEVCNKDVLVVAATNRPD
LLDDALLRPGRLDKIVYVPPPDQEARLAILKICTEKMPLDSDVSLEDVAEKTSFFSGADL
ENLCKEAALLTLQEESLDASCIKHASFVMSLENTKPSLTAQQIEFYQKLLKR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattctccgagaatacagactttattccttatgttgtgaacgcagcaatggat
gagaaaagtctgaagctgcttcccttggacactgaagaccagggtacccagaggtgtaga
ttaggaccaggcacaatggccagtctaggactgaagattggtagcctggttcagatctct
ctcctcggtggtcactgcctgtgcacagcttggccaagaagcgacctggctgaaggtttc
atgcagtttgactcaaaatgcgttacagtagaacttattgggaaaacgtataacatgtgt
agcgtgaaccttaatcagatcaaaatggtaccctgtaccaaactaaaatgcatacatgtt
aaagtttttgttaaaaatgtggaatttaaaaagggagcgacttctgctctgctgcatgaa
cttgtaaaagaagtgcttcgtaacgtttatgtttcacaaagccatgtcgtgtcctttgca
tcactggaagctcctattgaattaattgaaattcagagcttaaacccttctacctgtgag
gctggccgtatcactgctaaaacaaccatagagattactgaagtcaagaggctggagagt
tacatgaaccagctaaagaattcttccaagattccgttgggtggaatggaagatgtttgc
gcctcacttaaagaaattttaaacctgccgtttcattatccaagaacattacagagactt
ggtctatcttgtcctaagggagtactacttgttgggcctccaggggtagggaagactctg
cttgtaagaagtgttgctagggaggtgtgtgcccatttggtcactattagtggcccagta
atactgggctcgaggccaggggagagtgaagagaacctgagaagaatttttcagcagact
aaagaggcctctgaagatgggccgtgtgtcctcttcattgatgaattggattcgttgtgc
cctaagaggacaggctctacaaatgcaactgaaaaccgccttgtcgctcagcttttaaca
ctgatggatggtatcgggagcgagggccatatggtcattatggcagcgaccaaccggcca
gatgctttggatccagcgcttaggagatcgggtcggtttgacagagaggtcattattggt
gccccaaccctgaaacagaggaagtctatattagaaatgctcagcacacagatgcctctt
tgcagcgatgttgatgtagcctttttagcagaaatgaccactggatatgttggagctgac
cttacagcactctgtagagaagctgctttgcaggcaattctccacactagccaggacgcg
gggagtcacttgataagaatgagcaactttttggaagcactgaagaaagttcatccatcg
tgcctcagaagcagcattggtcaaactgacttcagacctgttgcctgggagcacattggg
ggtctcgaagatgtcaagttaaaactgaaacagagcattgaatggccaatgaagttccct
gaagcgtttatcaggctaggactgtctcgcccaaaaggggttcttctgtatggacctcca
ggctgcgctaagaccacacttgtgaaggccgcagccactagctgtcactgttccttcctg
tctgtcagtggagccgacctcttctctccttatgttggagactcggagaagacgctggct
caggtattccagcaagcacgtgcgtgcgccccgtcagtcctgtttctggacgagatcgac
tcgatcctgggatcacgggcagatagtaaagccagcagaggcgttcaggacagagtgctg
tctgtgattctcaacgagttagatgggattggactgaaagtgacagagaggagaggacca
gcaagtaagaaatgcctacaggaaggtttgccagaacaacaggaatgtgacaggcagctt
gattatcaggaggtatgcaacaaagatgtcctggttgtagctgcaacgaacagacctgac
ctgttggatgatgcgctgctacgacccggaagattagataaaattgtttatgtgccgcct
cctgaccaagaggccaggcttgctatattgaagatttgtacagagaagatgccattagac
tcagatgtgtccttagaagatgtagcagaaaaaacaagtttcttctccggagcagatctt
gaaaatctttgcaaagaggctgctttgcttacattacaagaagaaagtctggatgcttcc
tgtataaaacatgcctcctttgtgatgtcattggaaaatacaaagccctccctaacagca
cagcaaattgagttttatcagaaactgttaaaaaggtag
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