KEGG   Acipenser ruthenus (sterlet): 117429402
Entry
117429402         CDS       T07327                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117429402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117429402
   03400 DNA repair and recombination proteins [BR:arut03400]
    117429402
Spliceosome [BR:arut03041]
 Complex B
  Other components
   Prp19 complex
    117429402
 Complex C
   Prp19-CDC5 complex
    117429402
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    117429402
SSDB
Motif
Pfam: BCAS2 Sterile
Other DBs
NCBI-GeneID: 117429402
NCBI-ProteinID: XP_033904723
LinkDB
Position
28:20872187..20875884
AA seq 225 aa
MAGTSSVAGDVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDFST
FETEIMRNEFERLAARQPMELLGMKRYELPAPSSGQKNDITAWQDCVNNSMAQLEHQAVR
IENLELMSQYGSNSWKLYNENLMHLIELSQKELQRVRKEIQDLNWQRKNDQMKGGAKLRE
LESNWVSLVSKNYEIERAIVQLESELCQLNQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcaccagctcagttgccggggatgtgtttgtggacgctttgccttatttcgat
cagggatacgacgctgctggcgtgcgagaggcggcggccgcgctagtggaagaggagacg
cggcgctacagacccacgaagaattacctgagttacctgcccacgccagacttctctacc
ttcgagacagaaatcatgcgcaatgagtttgagaggttagcagccagacagcctatggaa
ctcctgggcatgaagaggtatgagctgccagccccctcgtcaggacagaagaatgacatc
acagcgtggcaggactgcgtgaacaactcgatggctcagctggagcaccaggcggtccgc
attgagaacctggaactcatgtctcagtacggcagcaacagctggaagctgtacaacgaa
aacctgatgcacttgatagagctgtcacagaaggagctacagagggtcaggaaggagatt
caagacctgaactggcagaggaaaaatgaccagatgaaaggaggagccaaactgcgagag
ctggagtccaactgggtgtcgctggtcagcaagaactacgagatcgagcgagccatcgtg
cagctggagagcgagctgtgccagctgaaccagcagcacggggacgagaacaaggagaac
atccggcaggacttctga

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