Acipenser ruthenus (sterlet): 117429513
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Entry
117429513 CDS
T07327
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04350
TGF-beta signaling pathway
arut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117429513
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117429513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117429513
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117429513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Tissue_fac
C2-set_2
fn3_2
Sp38
Cadherin_C_2
Herpes_UL74
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
117429513
NCBI-ProteinID:
XP_034758015
LinkDB
All DBs
Position
19:complement(1843535..1966892)
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AA seq
1437 aa
AA seq
DB search
MERCGNDWACIFHQFSGSASIALSASGPRQFTPFWFSVEPVDTLAVRSSPVFLNCSAHSE
PPARVEWKKDGTFLNLASDDRRQLLPDGSLLIPSVVHSKHSKPDEGFYQCVATIDSLGTI
ISRAARLTVAGLPRFSSQPGASSVTQGDSVVLNCDINVDLVPFTRWELDQETLDLDERVV
KLPNGTLVISNASEADAGLYRCVVENVGPVKTSDEAELQVLPDTGTDRRLQFLSQPAPVM
KARGQDVLLPCVVSGSPAPTVRWMIGDKVIDESEARFKVVGGGSLYVMNLTEEDAGIYSC
LADNGNETIEAQAELTIQAPPQFLKRPSNIYAYESMDIVFECEVTGTPAPTVKWVKNGDA
VIPSDYFKIIKEHNLQVLGLVKSDEGFYQCVAENDVGNIQASAQLIILEHDVAIPAPPPT
SLTSATTDHVAPAGSPGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDNINYSVYYSQE
GATRERIENTSRPGELQVTIQNLMPETKYVFRVVAHNRNGPGESSTPLKVATQLEVQVPG
PAPNLQALATSPTSITVSWEMPLLGKGEIQNYKLYYMEKGLGNEQDVDVGGLSYTINGLK
KYTDYSFRVVAYNKHGLGVSTEDVVARTFSDVPSAPPQNLTLEVRNSKSIMVQWQPPPPG
THNGQITGYKIRYRKGLRKSEAAESTGGTQLFQLIDGLERGTEYTFRVAAITANGTGPAT
DWLTAETFESDLDESRVPDIPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH
AQTIKVDYKQRYYTIENLDPSSHYVLTLKAFNNVGEGIPVYESAATRPLSVPDPSPMLPP
VGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWKTNIPANTKYKTANTTNLYYMV
TGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTLETVPNSPPKDVTVVSKEGRPRTIIINW
QPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQDLTLDTSYYFKIQARNS
KGMGPMSEAVQFRTPKAESSDKMANDQASGPVKPGGRNTIPHREFGSVGRPSHSGSPTPT
LDNNMLLIIIVSVGAFTIIVVVIVAALCTWRTNSQQKKKRAACKSVNGSHKYKVNSKDLK
PPDLWIHHERLELKPIDKSPEPNPVMTETPIPHTSQDIPPVDTAMDSSILQRRNSYRGHE
SEDSMSTLAGRRGMRPRMMMPFDTQPPQPVISAHPIHSLDNPHHHYHCGSLASPAHSYLH
HQLNPRPLANSISHIDRANSSESVRNTPSTDPVPVVSQPACSVEHMEPEASFLSSAPEEE
PSRNPPTAHVRPSHPLKSFAVPAVPPAAPFESPALPSTPLLTQTGTTPQVHSVKTASIGT
LGRTRCPMPVTVPSAPDVPETSSMLEDVESNYETDELTEEMAHLEGLMKDLNAITTA
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatgtggaaatgactgggcatgcatcttccaccagtttagtggatcagcctcg
atagcactttcagcgtcgggcccgagacagttcacccccttctggttctcggtggagccc
gtcgacacgctggctgtgcgcagctcccctgtcttcctgaactgctcggcccacagcgag
cccccggcgcgggtggagtggaagaaggacggcaccttcctgaacctggcctccgacgac
cgacgccagctgctacccgatggctccctgctcatccccagcgtggtgcactccaaacac
agcaagccagacgagggcttctaccagtgcgtggccaccatcgacagcctgggcaccatc
atcagcagggctgcacgcctcacagtcgcaggtcttccaaggtttagcagccagccagga
gcttcttcggtaacccagggcgacagtgtggttctgaactgtgacatcaatgtggacctg
gtgcccttcactcgctgggagctggaccaggagacactggacctggacgagagggtggtc
aagctgcctaacggcaccctggtcatcagcaacgcctcggaggccgatgccggcctgtac
cgctgcgtggtggaaaacgtcgggcctgtgaaaaccagcgatgaggctgagcttcaggtt
ctaccagacacgggcacagacaggagactgcagtttctgagtcagcccgcccctgtgatg
aaggctagggggcaggacgtgcttctgccatgtgtggtctcggggtcccctgcacccaca
gtccggtggatgattggagacaaggtcatcgatgaaagtgaggccaggtttaaggtggta
ggaggcgggagtctgtatgtgatgaacctcacagaggaggatgctgggatatacagctgc
ttggcggacaacggcaacgaaaccattgaggcgcaggcagaactgacaatccaagctcct
ccacagttcctgaagaggccgagtaacatctacgcctacgagtccatggacatcgtgttc
gagtgtgaggtgactggcacgcctgctcccaccgtcaagtgggtcaaaaacggggacgcg
gtcattcccagcgactacttcaaaatcatcaaagaacataacctgcaggttttagggctg
gtgaagtcggatgaagggttctaccagtgcgtggctgaaaatgacgtggggaatatacag
gccagcgctcagcttatcatactggaacatgatgttgccattccagcaccccctcccacc
tcactgaccagtgccactactgaccatgtagcaccagcgggcagccccggacccaccccc
tcggccccccgggatgtggtggcttcgctggtatccacacgctttatcaagctcacctgg
cgcctgcccgcggagccacacggagacaacatcaactactctgtctactacagccaggag
ggcgccaccagggagcggattgagaacaccagccgaccaggagagctgcaggtgaccatc
cagaacctcatgcctgaaaccaagtacgtgttccgagtggtggcacacaacaggaacggg
ccaggagagagctccacccctctcaaggtggccacgcagcttgaagtccaggtccctggt
cctgcccccaatctgcaagcgctcgccacgtctccaacctccatcactgtgagctgggag
atgcccctgttgggcaagggagagatccagaactacaagctgtactacatggagaaggga
ctggggaatgagcaggatgtagatgtaggaggactttcctataccatcaacgggctgaag
aaatacacagactacagcttccgagtggtggcatataacaaacatggactgggtgtgtcc
acagaagacgtagtggccaggactttttcggatgttcccagtgctcctcctcaaaactta
acactggaagtgcgcaattctaagagcatcatggtccagtggcagcccccaccacctggc
acccacaatgggcagatcacaggctacaagatccgctatcggaaagggctgcggaagagc
gaggcagcggagagcacgggcggcacgcagctctttcagcttatagacggtctggagcgt
ggcacagagtatacctttcgcgtggctgccattactgcaaatggaactggcccagccacg
gactggcttactgcagagacatttgagagcgacctggatgagagccgagtgccggacatc
cccagctctctgcacgtgcggccgctggtcaccagcattgtggtcagctggacaccaccg
gagaaccagaacatcgtggtcaggggctacgccatcggctacggcatcggcagcccccac
gctcagaccatcaaggtggactacaagcagcgctactacaccatagagaacctggaccca
agttcccactatgttctgacgctcaaagccttcaacaatgttggagaggggatcccggtg
tacgagagtgcggctaccaggccattgtcagtaccagacccttcccccatgctgccaccc
gtgggagtgcaggcatcagtcctgagccacgacaccatcaaggtcacctgggccgacaac
tccctgcccaagaaccagaagataaccgacgctcgctactacacggtgcgctggaagacc
aacatccctgccaacaccaagtacaagactgcaaacacaacaaacctttactacatggtg
acggggctgaagcccaataccctgtatgagttttcagttatggtcactaaaggacgtcga
tccagcacttggagcatgacggcgcatgggaccacccttgagacagttccgaactctccc
ccaaaagacgtgactgtggtgagcaaggaagggagacctcgaaccatcatcatcaactgg
cagcctccgtccgaagccaacggcaagatcacaggctacatcatctattacagcacggat
gtgaacgctgaagttcatgactgggtcattgagccagtggtggggaacagactcactcac
cagattcaggatttaacccttgatacatcgtattacttcaaaatccaggcacggaattct
aaaggaatgggacccatgtcagaggcggtgcagttcaggactcccaaagctgaatcttct
gacaaaatggctaatgaccaagcttctggaccagttaaaccaggcggtcgcaacacaata
ccacacagggagttcggctcagttgggagacccagccactcggggagcccgacccccact
ctggataacaacatgctgctgattataatcgtgtctgtgggcgccttcaccatcatcgtc
gtggtgatcgtggctgccctctgtacctggcgcaccaactcccagcaaaagaagaagagg
gcagcctgtaaatcagtgaacggctctcacaagtacaaggtcaactcgaaggacctgaag
ccaccagacctgtggatccaccacgagaggctggagctgaaacccatcgacaagtctcca
gagcccaaccctgtcatgacggagacacccatcccccacacctctcaggacatcccgcca
gtggacaccgccatggacagcagcatcctccagcgacgcaactcctaccgcgggcatgaa
tcagaggacagcatgtccacactagcagggcggcgggggatgagacccagaatgatgatg
cctttcgacacccagcccccacaacctgtgattagtgctcatcccatccattccctcgat
aaccctcaccaccattatcactgcggcagcctggcctccccggcacacagctatctccac
catcagctcaacccacggccgctcgccaattccatctcccacatagacagggccaactcc
tcagagtctgtgaggaacacccccagcactgaccctgtgccggtagtgagtcagcctgcc
tgcagcgtggagcacatggagcctgaagccagcttcctgagcagcgcccctgaggaggag
cccagccgcaacccccccaccgcacacgtgcgtccatcacacccgctcaagagctttgct
gtgcctgcggtgccccctgccgcccccttcgagtcccccgcactgcccagcacccccctg
ctcactcagacagggaccacgccccaggtgcactctgtgaaaacagcctccatcgggacg
ctgggaaggacccgctgtcccatgccagtcacagtgcccagcgcacccgatgtacccgag
accagcagcatgctggaggatgtggagagtaattacgagacggatgaactgaccgaggaa
atggcccatctggagggactgatgaaggacctaaacgccatcacaacagcctga
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integrated database retrieval system