Acipenser ruthenus (sterlet): 117429521
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Entry
117429521 CDS
T07327
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117429521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117429521
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117429521
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
117429521
NCBI-ProteinID:
XP_034759108
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Position
20:26969197..26985795
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AA seq
811 aa
AA seq
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MKRCDSADMERSVASETTLTLESEDYLSEDENSQPAKTPKNKPKSLLLGNAFGNKESDSR
KAPMDTVCQEEMAAVNVRFNTNFDRMTSGDAAMSSKDRYPHGRFVMKRLFAVVASGDVSQ
LDGLYDYLQKNQKHLTDSDFIDRSNGKTCLLKALLNLKNGKNDTIKVLLDIAEKTDDLPK
LVNAVYTDCYFKGQSAIHIAIERRSKFYVELLVTKGADVQSKACGKFFQQKKGNGFYFGE
YPLSLAACTNQLDIVTFLMVNPYQKADITAQDSIGNMVLHVLVTIADNTPENTSFVTMMY
DAILLRAAKLHPELRLEDIANNEGLTPLKLAAKTGKIGIFRHIIRREIDDKECRHLSRKF
TEWAYGPVHSSLYDLNSIDSYEDNSVLEIIAHGCEIPNRHELLQLEPLNKLLQEKWDRFA
GFMFYFNFFCYFVYLVIFTTVSYYRLEGKPPFKIEATVNGKLRLTGQLISVAGALYFLFK
GIKDFVIKRHTFQSLLLDGYCDILFFLQAVMFLTSSVLYTCGMEEYVALLVLSQALAWIN
LLYFSRGFQHMGIYSVMIQKMILRDIMRFLFVYMVFLFGFSTALVTLIEDDPPQGQNATE
GNKQEDCKRETYNNIYFTTMELFKFTIGMGDLEFTEQYKFKLVFYSLLICYIILTYVLLI
NMLIALMGETVDKISKESKSIWKLQRAITILNLEKSLPNCLKTKLRSGVIKELGHSAGED
SRRCFRVEEVNWTRWNCNLGIINEDPGQGTVPSIIYPEPTLRTRERSWRRIVPLLRQLSH
QQRPPGNQQQQQEEEEMLTIRASSSQSEHRD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtgtgatagtgcagacatggagcggtctgtcgcctcagagaccacattaaca
ctggagagtgaggactacctgagcgaggatgagaattcccagccggccaaaacccccaag
aacaaacccaaaagcctgctcctgggaaacgcctttgggaataaggagtccgacagcaga
aaagcaccgatggatacagtttgccaagaagaaatggcagcagtgaatgtgagatttaac
accaatttcgaccggatgacttccggggatgctgctatgagcagtaaggaccgctaccca
catggcagatttgttatgaaaagactgtttgctgttgttgcctctggagacgtgtcccaa
ctggatggtttgtatgattacctgcagaagaaccagaaacacctcacagattcagacttc
atagatcgtagcaatggaaaaacctgcttactaaaggctctgctaaacttaaagaacgga
aaaaacgataccatcaaggttcttcttgatatcgcagagaaaacagacgacttgccaaag
cttgtaaacgcagtatatactgactgctatttcaaaggacagtcagcaatccatattgct
atagagagaaggagcaagttctatgtggaactgctggtgacaaagggagcagatgtccaa
agcaaggcctgtgggaaattcttccaacaaaagaagggaaatggcttttattttggtgag
tatcccttatcgctggctgcctgtactaaccagctcgacatcgtgacgttcctgatggta
aacccctatcaaaaagccgacatcaccgcccaggactccattgggaatatggttctgcac
gtgctggtcaccattgctgacaatactccagagaacaccagcttcgtcaccatgatgtac
gatgcgattctgttgcgggctgccaagcttcatccagaactcaggctggaagacattgcc
aataatgaaggactgactccattaaagcttgcagcaaagaccgggaagattgggatcttc
aggcacattatcaggcgtgagattgacgataaggagtgcagacacctgtccaggaagttt
acagaatgggcttatggaccagtgcactcatctctgtatgacttgaacagcatcgactcc
tacgaggacaactcagtgctggaaatcattgcgcacggctgtgaaataccaaatcgacat
gagttattgcaactggagcctctcaataaactgctgcaggagaaatgggacagattcgct
ggctttatgttttattttaattttttctgctattttgtgtacctggtcatatttaccact
gtttcctactacagactggaaggaaagccgccgtttaaaatcgaggccactgtgaatgga
aaattacgtctcactggacaactaataagcgttgcaggagcactttattttctcttcaaa
gggattaaagactttgtgattaaacgtcatacatttcaaagtttattgctggacggctac
tgtgatattcttttttttttgcaggcagtcatgttccttacctcctctgtgctgtatacc
tgtggcatggaggagtacgtcgctctgctggtcctctctcaagctcttgcctggatcaac
ttgctttacttctccagagggtttcagcacatgggcatctacagcgttatgatacagaag
atgatcctgagagatattatgcgcttcctgtttgtctatatggtgttcctctttgggttt
tctacagctttggtgaccttgattgaagacgatccacctcaaggacaaaacgcaactgag
ggaaataaacaggaagactgcaaaagagaaacgtacaacaatatctatttcaccaccatg
gagctgttcaagtttaccattggaatgggcgacctggaattcacagaacagtacaagttc
aagttagtcttttactcactgctcatctgttacatcatcttgacctacgttctcctgatc
aacatgctgatcgcactgatgggagagactgtggataagatttcgaaggaaagcaagagc
atttggaagcttcagagagccatcacaattttgaacctcgagaaaagtttgccaaactgc
ctgaagaccaaattgaggtcaggagtgataaaggagcttggtcacagcgctggagaagac
agcaggaggtgtttcagagttgaggaagtgaactggactcgctggaactgcaatctgggc
atcattaacgaggatcctggacaggggactgttccgagtatcatttatccagaaccaaca
cttagaactagagagcggagctggcgcagaatagttccactgttgaggcagctgagtcac
cagcaacgcccccctgggaaccagcagcagcagcaggaggaggaggagatgctaaccatc
cgtgcctcctcatcacagagcgagcacagagactag
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