Acipenser ruthenus (sterlet): 117429611
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Entry
117429611 CDS
T07327
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117429611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117429611
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117429611
Complex C
U5 SnRNP specific factors
117429611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
117429611
NCBI-ProteinID:
XP_033905219
LinkDB
All DBs
Position
27:complement(4129812..4147935)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAAFPYRGGPGGIPMPGGQMPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDIPVLY
HITGAISFVNEIPWVIEPVYIAQWGAMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQMELDPDEDSPVTDWLYDHQPLKDNTKFVNGSTYRRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
AIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWGPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETMEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
GAHPIRLYCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGGKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
NQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPAWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQVSWN
YNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYG
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcattcccttatcgaggtgggcctggtgggatcccaatgccaggtggccag
atgccagattatatgtctgaagaaaaactgcaggaaaaagcccgcaaatggcagcagctg
caggcgaagcgctatgcagagaagagaaagtttggcttcgtggacgcccagaaagaggac
atgcctccagaacacgtccgcaagatcatccgtgaccacggggacatgaccaacaggaag
ttccgtcacgacaagagagtttatctgggtgctctgaagtacatgccccatgcggtgctg
aaactgctggagaacatgccgatgccctgggagcagatccgagacatcccagtgctctac
cacatcaccggggccatctcctttgtcaatgagattccctgggttattgaaccagtctac
attgcacagtggggcgccatgtggatcatgatgcgtcgtgagaagagggacaggcgacac
ttcaagaggatgcgcttccctcccttcgatgacgaggagccgccgctggactacgctgac
aacatcctggacgtggagcccctggaggccatccagatggagctggacccagacgaggac
tctcccgtcacggactggctgtacgaccaccagccgctcaaggacaacaccaagtttgtg
aacgggtccacatacaggcgctggcagtttaccttgccaatgatgtccacgttgtaccgc
cttgccaatcagctgctgactgacctggtggacgataactacttctacctgtttgacctg
aaagccttcttcacctctaaggcactcaacatggccattccagggggtcccaagtttgag
ccgctggtcagagatattaacctgcaggatgaagactggaacgagttcaatgacattaac
aagatcattatcaggcagcctatcagaacagagtacaagattgcattcccctacctgtat
aacaacctgccgcaccacgtccatctcacctggtaccataccccgaatgtggtgttcatc
aaaacagaagaccctgacttgcctgctttctattttgaccccctgatcaaccccatctct
cacagacactctgtcaagagccaggagcccctgcccgatgatgatgaggagtttgagctg
ccagagtttgtggagccgttcttgaaagacacccccctgtacacagacaacactgccaat
ggcatcgccctactgtgggcaccccgtccctttaacctgcggtcagggagaacgcgcaga
gccatcgacatcccgctcattaagaactggtatcgggagcattgccctgcaggtcagcct
gtgaaagtgcgtgtgtcctatcagaagctgctgaagtactacgtattgaatgctctcaaa
cacaggcctcccaaagcccagaagaaaagatatttgttccgctcgttcaaagcgaccaag
ttctttcagtcgacgaagctggactgggtggaagtggggctgcaggtgtgccgacagggc
tacaacatgctcaacctgctgatccacagaaagaacctcaactaccttcacctggactat
aacttcaacctcaagcccgtcaagactctcaccacgaaggaacgtaaaaagtccaggttt
ggaaatgcgttccatttgtgcagagaggttctgcgtctcagcaagctggtggtagacagc
cacgtgcagtacaggctggggaacgttgatgccttccagctgtcagacggcctgcagtac
atctttgcccatgtgggccagctgactgggatgtacagatacaagtacaagctgatgaga
cagatccgcatgtgcaaggacctgaagcatctcatctactacaggtttaacactggtcca
gttggaaaggggcccggctgtggtttctggggaccaggatggagggtgtggctgttcttc
atgaggggcatcactcctctgctggagcggtggctgggaaacctgctggccaggcagttc
gaagggcgtcactccaagggcgtggcgaagactgttacgaagcagcgcgtggagtctcac
ttcgatttggagctgagagccgctgtcatgcacgacatcctggacatgatgcctgaggga
atcaaacagaacaaagccaggaccatcctgcagcacctcagtgagtcctggaggtgctgg
aaggcgaacataccctggaaggttcctgggctgcccaccccaattgagaacatgatcctc
cgctacgtgaaagcgaaagcagattggtggaccaacactgcccattacaacagagagcga
atccgtcgcggcgccactgttgacaagacggtctgtaagaagaacctgggccgcctgact
cgactctacctgaaggctgaacaggagaggcagcacaactacctgaaggatggtccgtac
attacagcagaggaggctgttgctatctacaccaccactgtccactggctggagagcagg
aggttctctcccattcccttccctccactgtcctacaaacacgacaccaagctgctcatc
ctggccctggagaggctgaaggaagcatacagtgtgaaatctcggctgaaccagtctcag
agagaggagctgggtttgattgagcaggcttacgacaacccccacgaggcgctgtccagg
atcaagcgtcacctcctcacacagagagccttcaaagaggttggtattgagttcatggac
ctgtacagtcacttggtccctgtgtatgacgtggagcccctggagaagatcaccgatgct
tacctggatcagtacctgtggtacgaagctgacaaacgcaggctctttccgccttggatc
aagccagccgacacggaaccacctccactgctggtctacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagacgatggagggagagtgcaacgtgatgctggagtctcgc
tatgagaagatgtacgagaagattgatctgacgctgctcaacaggctgctgcgtctaatt
gtcgaccacaacattgctgattacatgactgccaaaaacaacgtggtcattaactacaag
gacatgaaccacacaaactcgtacggcatcattagagggctgcagtttgcctccttcatt
gttcagtactacggcctggtgatggatctgctggtgctggggttgcaccgcgccagtgag
atggccggccctccacagatgcccaatgacttcctgagcttccaggacattgccactgag
ggagcccaccctatccgcctgtactgcagatacatcgaccgcatccatatcttcttcaga
tttacagcggatgaggcaagagatctgattcagaggtacttgaccgagcatcctgacccc
aacaacgagaacattgtgggttacaacaacaagaagtgctggcccagagatgctcgaatg
aggctcatgaagcatgatgtcaacctgggtcgagctgtgttctgggacatcaagaaccgc
ctgcctcgctctgtgaccacggtccagtgggagaacagttttgtgtctgtgtacagcaag
gacaaccccaacctgctcttcaacatgtgcgggttcgagtgccgcatcctgcccaagtgc
cgcaccagctatgaagagttcacgcacaaggatggggtctggaatctgcaaaatgaggtg
acgaaggagcgaaccgcccagtgtttcttgagagtggatgatgaatccatgcagcggttc
cacaaccgggtcaggcagatcctaatggcttctggatccaccaccttcactaagattgtg
aacaagtggaacactgctctgatcggtctcatgacgtatttccgagaggccgtggtaaac
acacaggagctcctggaccttttggtgaaatgtgagaataagatccagacccgaatcaag
atcggactcaactccaagatgcccagtcgattccctccggtcgtcttctacacacccaag
gagctgggagggctgggcatgctgtccatgggccacgtcctcatcccccagtctgacctg
aggtggtcgaagcagactgatgttggcatcacccacttccgctctggaatgagccacgag
gaggatcagctgattcccaatctgtacagatacatccagccctgggagagcgagttcatc
gactctcagagagtgtgggcagagtacgctttgaagaggcaggaggccatcgcgcagaac
agacgtttaactctggaagacttggaagattcctgggacagaggtatcccccgaatcaac
actctgttccagaaggacagacacacgctggcttacgacaaggggtggcgagtgaggaca
gacttcaaacagtaccaggtgctgaaacaaaatccgttctggtggacccaccagcgtcac
gacgggaagctgtggaacttgaacaactaccgaaccgacatgatccaagcgctgggaggt
gtggagggcatcctggagcacacgctcttcaagggaacctacttccccacctgggagggt
ctcttctgggagaaggcgagtggttttgaggaatccatgaagtggaagaaactgaccaac
gctcagaggtctggtctgaaccagattccaaacagaaggttcactctctggtggtcgccc
accatcaacagggctaatgtgtacgtaggtttccaggtgcagttggatctgacaggtatc
ttcatgcacggcaagattcccactctcaagatctccctcatccagatcttcagagctcac
ttgtggcagaagatccatgagagcgtcgtcatggacttgtgtcaggtgtttgaccaggag
ttggatgctctggagattgagactgtgcagaaggagaccatccaccccaggaagtcctac
aaaatgaactcttcttgcgcagacatcctgctttttgcctcttacaagtggaacgtctcc
cggccgtctctgcttgccgattcaaaagatgtgatggacagcaccacaacccagaagtac
tggattgatatccagctgcgttggggagactatgactcccatgacattgagagatatgcc
agggctaaattcctggattacaccacagacaacatgagtatctacccatctcctactgga
gtcctcatcgctatcgacctggcttacaacctgcacagtggctacggtaactggttccca
ggagggaagccactgatccagcaggccatggctaagatcatgaaggcgaacccggctctg
tacgtgttgagggagcgaatccgcaaggggctgcagctctactcttccgagcccactgag
ccgtacctgtcctcccagaactacggggagctcttctccaatcagattatctggtttgtg
gatgacaccaatgtgtaccgagtaaccatccacaagacctttgaaggcaacttgaccaca
aagcctataaacggagccattttcatcttcaatccccgaactgggcagcttttcctgaag
attatccacacctctgtgtgggctggacagaaacgtctcggacagctggccaagtggaag
acagctgaagaagtagctgccctgatccgatccctgcctgtggaggagcagcccaagcag
attatcgtcaccagaaagggcatgctggatcccctggaggtccatttgctggatttcccc
aacattgtgatcaaggggtctgagctgcagctgcccttccaggcctgcctgaaggtagag
aagtttggagatctaatcctgaaggccacggagccacagatggtgctgttcaacctctac
gatgactggctgaagaccatctcctcttacaccgccttctcccgcctgatcctgattctg
agggccctacacgtgaataacgaccgcgccaaagtcatcctgaagccggacaagaccacc
atcacggagccccaccacatctggcccacgctgacggacgaggagtggataaaggtggag
gtgcagctgaaggacctgatcctggcagactacggcaagaagaacaatgtgaacgttgcg
tctctgactcagtccgagatcagggatatcatcctggggatggagatctcagctccctcc
cagcagaggcagcagatcgctgagattgagaagcagaccaaggaacagtcccagctcact
gccacacagacccggacagtcaacaagcacggagacgagatcatcacctccaccaccagc
aactacgagacgcagaccttctcctccaagacagagtggagagtccgagcgatctctgct
gccaatctgcacctgcgtacaaatcacatttacgtttcgtcggatgacatcaaggagacg
ggctatacctacattctgcccaagaacgtgctgaagaagtttatctgcatctcggacctt
cgtgctcagattgcaggttacctgtacggcaccagccccccggataacccccaggtgaag
gagatccgctgcatcgtgatggtgcctcagtggggaacccaccagaccgtgcatctcccc
aaccagctcccacagcacgagtacctcaaggaaatggagccgctgggctggatccacact
cagccaaacgagtctccccagctgtcccctcaggacgtcaccacgcacgccaaggtcatg
gctgacaacccggcctgggacggggagaagaccatcatcatcacctgcagtttcaccccc
ggctcctgcaccctcactgcctacaagctgacccccagcgggtatgagtggggcagacag
aacacagacaaggggaacaaccccaaggggtacctgccctcgcactacgagagggtgcag
atgctgctgtctgatcgcttcctgggcttcttcatggtgcccggccaagtctcctggaac
tacaacttcatgggtgttcgccacgatcccaacatgaagtacgatctgcagctgtccaac
cccaaggagttctaccacgaggtgcacaggccctcgcacttcctgaactttgcctcgctg
caggagggggagatctacaacgccgaccgggaggacatgtacggttag
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integrated database retrieval system
