Acipenser ruthenus (sterlet): 117429634
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Entry
117429634 CDS
T07327
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117429634
03036 Chromosome and associated proteins [BR:
arut03036
]
117429634
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117429634
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117429634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
117429634
NCBI-ProteinID:
XP_033905274
LinkDB
All DBs
Position
20:22709630..22725497
Genome browser
AA seq
1729 aa
AA seq
DB search
MSAFVESEAEESEEEYDEEGDVQPRRTKKFAGVQEEEEEEEEEEENPEDQDEHGNLRGLI
DDDVVDDDEEEEEEEDEGASDSAEEVGHRKRKRSFDRLDDDDLDLIEENLGVKVKRQKFR
RVRKMSDDEDEEEDEVREGHEKDLIAEEIFQGTEGEEGEVIEGPIHGHEEDEEEEDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGGDFDFAEFEHEGYDDVEEEEEE
PEDETWDRPKKQTKKRVGRRSIFEIYEPSELESSHLTDQDNEIRSTDMPERFQLRTIPVK
PAEDDELEVEADWIYRNAFSTLTISIQESSDYLDRGTTSSFSRKGPSTIQKIKEALNFMR
NQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQAFQFEQ
ISADPDKPLADGIRPLDTADLERLKDVQSIDELRDVYNHFLLYYGRDIPKMQNAAKASKK
KLKKIKEVSEEDGEQDAEVEEEEEEEEEGRKGPDLKLASRRDMYSICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSSPEAVLEGARYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKEVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAE
EETLLAIDICIDMKGVKGYSEQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALKQFI
YPQMAKELKNKLISEAKENIIKGCSRKLYNWLKVAPYRPDQQVEEDEDFMDDNPGKGMRV
MGVAFAPGRDTPVFCSLINGEGEATDFLRLPYFLKRRNAWREDEREKKLQDLETLKKFLL
SKKPHVVAVAGENRDAHMIMEDIKRTVNELEQEQQIPTIGVELVDSELAVLYMNSKKSEN
DFRDYPPLLRQAVSIARKIQDPLVEYAQVCSSDDDILCLKLHPLQEHVVKEDLLSALYCE
FINRVNEVGVDVNRAIAHPYTQSLVQYVCGLGSRKGSHLIKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRATY
RPPNTEEIFNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVRSRMDNGVAGFIPTKFLSDKVVKHPEERVKVGM
TVHCRIMKIDIEKFSVDLTCRTSDLMDKSNEWKLPKDTYYDFDAEAEDLKLEEDAKKKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTITWKVGEGIYQHV
DVREEGKENAFSLGHTLWINNEEFEDLDEITARYVQPMASFARDLLNHKYFHDCNGGERK
KMEELLIKTKKEKPAFIPYYMSACRELPGKFLLGYQPRGKPRIEFVTVTPEGYRYRSQVF
PSVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASMGTTPANINIADLTRAVNALPQNMTS
QMFSAIAAVTGQSQNPNATPAQWSSSQYGYSGSGGGSAGGGSSAYHVFATPAQQPVATPL
MTPSYSYTTPSQQTITTPQYPSNSTPQSSHGPPSSSSSSSSRHRQQAKQNSHTAVDWGKM
AEQWLQEKEAEKRKQKTRVTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccttcgtagagagcgaggctgaggagtccgaggaggagtatgacgaggagggc
gacgttcagcccaggaggaccaagaagtttgcaggagtccaggaagaggaggaggaagag
gaggaggaggaagagaacccagaagatcaggacgagcacgggaacctgcgggggctgatc
gacgatgacgttgtggatgatgatgaggaggaagaggaggaggaggatgaaggagccagc
gactctgcggaggaggtcgggcatcggaagagaaaacgcagttttgatcgcctggatgat
gatgatcttgacctcattgaggaaaatttgggagttaaagtgaaaaggcaaaagttccgg
cgtgtgcgcaagatgtctgacgatgaggatgaggaggaagacgaggttcgcgagggccac
gagaaggacctgatcgcagaggagatcttccaagggacggagggggaggagggggaggtg
atcgaggggcccatccacggacacgaagaggatgaggaggaggaagacgaggaatccgat
attgatgacttcattgtggatgatgatgggcagcccctaaagaagccaaaatggagaaag
aaactgccaggatacacagacgcggctcttcaagaggcccaggagatcttcggcggggac
tttgatttcgcagagtttgagcacgagggctatgacgatgtggaggaggaagaggaagag
cccgaggatgagacgtgggaccggcccaagaaacagaccaagaagagggtgggccgccgc
agcatcttcgagatctacgagcccagcgagctggagagcagccacctgactgaccaggac
aacgagatccgctcgacagacatgccggagcgcttccagctgcgaacgataccagtgaaa
ccagcagaagatgacgagctggaggtagaagctgattggatctacaggaatgccttttcc
acacttaccatctccattcaggagagctcggattacttggatcgtggcacaaccagtagc
ttcagtaggaaaggccccagcactatccagaaaatcaaagaggccctcaacttcatgagg
aaccagcactttgaggtcccgtttattgcgttctacagaaaggagtatgtggaaccggag
ctcaatatcaacgatctgtggaaagtttggcagtgggatgaaaagtggactcagctgaag
acccgcaagcagaacctgacccgcttgttccagaagatgcaggcgttccagttcgagcag
atctccgccgatccagacaaaccgctggcagatgggatcagacctctcgacactgcagac
ttggagagattaaaagatgtccagtccattgatgagctgagagacgtctacaaccacttc
ctcctgtactatggtcgtgacattcccaagatgcagaatgcagcgaaagccagtaaaaag
aaactgaagaaaatcaaggaagtttccgaagaggatggtgagcaggatgctgaggtagag
gaggaggaagaggaggaggaagagggacggaaaggacctgatctgaagctggcttctcgc
agagacatgtactcgatctgtcagactgcagggctggacggtcttgccaaaaagtttggt
ctgactccggagcagtttggtgagaacctgcgagacagctaccagcggcacgagactgag
cagttcccagctgagccgctggagctggctaaggattacgtttgcagtcagttctcgagc
ccggaggccgtgctggagggggcgcgctacatggtggccatgcagatcgcacgggagccg
ctggtcagacacgtactgcgacagaccttccaggagagagccaagatcaacatcaagccc
acgaagaagggcaagaaggaagtggatgaagcccactatgcttattcattcaaatacctg
aagaacaagcccgtgaaggagctgagtggagaccagtttctcaagatgtgcctggcagaa
gaggaaacgttgctggccatagacatctgcattgatatgaagggggtaaaagggtacagc
gagcagacgtatttcgacgagatcaagcagttctattaccgtgatgagttcagtcaccag
gtccaggagtggaacaggcagagaaccctggccattgagagagcactgaagcagttcatc
tacccgcagatggccaaagaactcaagaacaagctgatctccgaggctaaagagaacatc
atcaagggctgcagcagaaagctgtataactggttgaaagtggctccttaccgtccggat
cagcaggtggaagaagacgaggatttcatggacgacaatccgggcaaaggaatgagagtg
atgggagtggccttcgctccaggcagggatacccctgtgttctgctccctcattaacgga
gaaggagaagccactgacttcctgcgcttgccgtactttctgaagaggaggaacgcgtgg
cgcgaagatgaaagggaaaaaaagttgcaagacctagaaaccttgaaaaagttcctgttg
agcaagaaaccgcacgtggttgctgttgcaggagaaaatagggatgcccatatgatcatg
gaagatatcaaacgaacagtcaacgagctggagcaggagcagcagattcccaccatcggc
gtggagctggtcgacagtgaactggctgtgctgtacatgaacagcaagaaatcagagaat
gacttcagagactaccctccattgctgcgacaggcagtatcgatcgctcgaaagatccag
gatcctctggtggagtacgcccaggtctgcagctcggatgatgatattctgtgtttgaag
ctacaccctcttcaggaacatgtggtgaaggaggaccttctgagcgctctgtactgtgaa
tttataaaccgagtcaacgaggtgggagtggatgtgaacagggctatagctcacccatac
acgcagagcctggtccagtatgtgtgcgggctggggtctcgcaaagggtctcatctgatc
aagatcctgaagcagaataacaccagactggagaacaggacccagctcgtcacaatgtgt
cacatgggaccgaaagtattcatcaactgtgctggctttatcaaaattgatacagcgtct
ctaggggacagcactgactcgtacatcgaggtgctggacggctcgcgggtgcaccccgag
acctacgagtgggcacggaagatggcggtggacgcgctggagtacgacgagtccgcggag
gatgccaatcccgccggggccctggaggagatcctggaaaacccagagaggctgaaggat
ctggacctggatgccttcgcggaggagctggagaggcagggctatgggaacaagggtata
acactgtatgatatccgcgctgagctaagctgcaggtacaaggatctaagagccacctac
cggcctcctaacacagaggagatctttaacttgctgactaaggaaacgccagagaccttc
tatataggtaaactcatcaccagtattgtgacagggatagctcacaggcgaccccagggc
gagagctatgaccaggctatcagaaacgatgagacgggcctgtggcagtgccccttctgt
cagcaggataacttccctgagctcagtgaggtctggaatcactttgacagtgggtcctgt
cctggccaggctattggagtgaggtcgcgaatggataatggcgttgcagggtttatacca
accaaattcctcagtgacaaagtggttaaacaccccgaggaaagagtcaaggtgggaatg
actgtgcactgcaggataatgaagatagacattgagaagttcagcgtggacctgacgtgc
cggacatccgacttgatggacaagagcaacgagtggaagctgcccaaagacacgtactac
gacttcgacgccgaggcagaggatctgaagctggaagaggacgccaagaagaaacagcag
cgcacaacctacataaagagagtgatcgctcacccatcattccacaacatcaacttcaaa
caggcggagaagatgatggagaccatggaccagggtgatgtcatcatccgacccagcagc
aagggggagaaccacctgaccatcacctggaaggtgggggaaggcatttaccagcacgtg
gacgtccgggaggagggcaaggagaacgccttcagcttggggcacacgctctggataaac
aacgaggagttcgaggatctcgatgagatcacggctcgttacgtgcagcccatggcctcg
tttgcacgtgatcttctaaatcacaaatatttccacgattgcaatggtggagagagaaag
aaaatggaggagcttctaataaaaaccaaaaaggagaagcctgcgtttatcccttactat
atgtctgcgtgtagagagctgcctgggaaattcttgctgggataccagcctcgtgggaaa
cctaggatagagtttgtaaccgtcacacctgaaggataccggtacaggtcacaggtattc
ccctctgtgaacggactcttccgctggttcaaagatcactaccaggaccctgtaccaggt
attactccaagcagtagcagcagaactcgaaccccagcctccatgggcaccactccagcc
aacattaacatagcagacctgacccgtgctgtgaacgcgctcccccagaacatgacgtct
cagatgttcagcgcgatcgcggcggtcacggggcagagtcagaaccccaacgccactccg
gcgcagtggtcctccagtcagtacgggtacagcggcagcggagggggcagcgccggcggg
ggcagcagtgcctaccacgtgtttgccactccagcacagcagcctgtggcgacccccttg
atgacccccagctactcgtacaccacccccagccagcagactatcaccaccccccagtac
cccagcaactccaccccccagtcctcccacggtcccccctcctcctcctcatcgtcctcc
tccaggcacaggcagcaggcaaaacaaaactctcatactgccgtggactggggtaagatg
gcagaacagtggctgcaagagaaggaggcggagaagaggaaacagaaaacgagggtgacc
ccacggccgtctcccagccccatgatcgagagcacgcccatgtccatcgctggggacgcc
acgcctctgctggacgagatggaccggtag
DBGET
integrated database retrieval system
