Acipenser ruthenus (sterlet): 117429713
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Entry
117429713 CDS
T07327
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117429713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117429713
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117429713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
117429713
NCBI-ProteinID:
XP_034763323
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All DBs
Position
27:complement(16490343..16503663)
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AA seq
1050 aa
AA seq
DB search
MLLKTERTLHLKSSRGKTVRVVREHYLREHVPCFSSLCQASCHNDGKLLPGNVTHYIVPD
WKVLQDFLEILEFPSLRGVIFTQTACQSVQHHKGRKQYNRLRSLLKDARHECILFSNEFQ
RYSYCPREKGEAMEKWQTRCIYYAAVWYYHHLAGQKPLVVITEDQDAIEKYGSENKDIYV
ISIKDYLEGFWPDLKAAHELYESIVHSLRERENESQEKEYAEHLPVEILQAGIKSGRYIQ
GTLNVNKHRAQVEAFVRIQGSANKNTELSSDVLVCGGKQRNRALHGDVVAVELLPRSEWR
GRATALSQSEGEDRLAEELQSQPMPTGTVVGIIQRNWRDYVVTFPPKEEVQSQGKNSQKI
LVTPWDYRIPKIRISTQQAETLQDHRVVARIDSWESTSLYPNGHFVRVLGKAGDLETEVA
AILVENNIQVPPFSEAQMREMPVNNPESPWRVESEQEPERLDLRETHLVFSIDPQGCEDV
DDTLSVRRLANGNVELGVHIADVTHFVKLNSYTDLEARARATTYYLADRRYDMLPPILSA
DLCSLLGSVDRYAMSVMWELDKSSYEVKRVWYGRTIIRSSYKLFYEAAQALLDGDWSVVE
QIPELAGLGGETRQEKLDQLVWAIGSLADIARHLRAKRDRGGALELEGVEVRVQLDAQKN
IAALVPRQPLEVHETVAECMILANHWVAKKIWERFPHQALLRHHPQPRQEFFTELVECAK
AKGFTIDTRSNKSLADSLDRAVDPADPLVNKLLRFMATQAMSNALYFSTGAYPEEEYYHY
GLALERYTHFTSPIRRYADTVVHRLLMAAILRDKGAELRETPASNKELEELAQHINSKNK
AAQHAQKQSTELFQCMYFKDKDPVTDERCIADAVIYSIRANGLLVFVPRYGIKGAVYLKN
KEGLVVCVNPDGSCEWKPGTLKRFQDRISSTTADGSETFSLFQHITVRISVQASRSHSES
IRMEIISNKPHKASDPQLHCDTPHPARADLVREVIRSAEEAQQAEEQASRAAVAGENQEY
CQTQGKSLYSLLEEIRELALLDVSAASLTP
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaaaaaccgaaagaaccctgcacttgaagagctcccggggaaagacagttcga
gtcgtccgggagcactatctgagagaacacgtcccttgctttagttctctgtgtcaggct
tcatgtcacaacgatggcaagcttcttccaggtaacgtgacccattacatcgtcccggac
tggaaggtgctgcaggacttcctagagattctggagtttccatcgctgaggggcgtcatc
ttcacgcagaccgcctgccaatcagtccagcaccacaaaggacgcaagcaatacaaccgg
ctgcgtagtttgctaaaggatgctcgtcatgagtgcattctgttctcaaatgaattccag
aggtattcctactgcccccgggaaaaaggagaggctatggagaagtggcagaccagatgc
atttactacgctgcagtgtggtactaccaccacctagcaggacagaaacctttggttgta
ataacagaagaccaggatgccattgaaaaatacgggagtgaaaataaagatatttacgtc
atatctattaaggactacctggagggtttctggccagacctgaaggctgcccacgagctg
tacgaatcaattgtccattctctgcgggagagggagaacgagagtcaggagaaggagtac
gcagagcacctgcctgtggagatcctgcaggcagggatcaaatccggacgatacatccag
ggcacgctcaatgtaaacaagcatagagcacaagtagaagcctttgttcgaatacaggga
tctgcaaacaaaaatacagagctgagcagcgacgtcctggtgtgcggcgggaagcagcgg
aaccgcgcgctgcacggggatgtggtggcggtggagctgctgccacggagcgagtggagg
ggcagggcgacggcgctgagccagagcgagggcgaggacaggctggcagaggagctgcag
agccagcccatgcccacaggtacggtggtgggcattattcagaggaactggcgggattac
gtggtaacctttccccctaaagaagaggtccagtcccagggcaagaattcccaaaagatc
ttggtgaccccctgggattatcggattcccaaaattcggattagcacgcagcaagccgag
acgctgcaggaccaccgagtggttgcacgcatcgactcgtgggagtccacctcgctctac
ccgaacggtcacttcgtcagagtgctggggaaagctggcgacctggagacagaggtggcg
gccattctcgtggaaaacaacatacaggtccctccgttctccgaagcccagatgcgtgag
atgcctgtgaataacccagagagcccgtggagggtggagtcggagcaggagccggagaga
ctggacctgagggagacgcacctggtcttcagcatcgacccccagggctgcgaggacgtg
gacgacacactgtctgtgcgcaggctggccaacggcaatgtggagctgggcgtgcacatc
gccgacgtcacgcacttcgtcaagctaaactcctacaccgacctggaggccagagccagg
gctaccacgtactatttagctgatcgccggtatgatatgctgcctcccatcctgagtgct
gacctgtgctctcttctcggcagtgtggataggtatgccatgagtgtgatgtgggagctg
gataagagctcttacgaggtgaagcgggtgtggtacggccgcacgattatccgctcctcc
tacaagctgttctacgaggcagcccaggctctgctggatggggactggagcgtggtggag
cagatccctgagctggctgggctgggcggagagacgaggcaggagaaactggaccagctg
gtctgggcaattggcagcttggcggacattgcgcgccacttgagggccaagcgggacaga
ggaggtgcgctggagctggagggtgtggaggtgcgtgttcagctggacgcccagaagaac
atcgccgccctggtgcccaggcagcccctggaggtgcacgagaccgtggcggagtgcatg
atcctggccaatcactgggtcgccaagaagatctgggagcgtttccctcaccaggccctg
ctccgccaccacccccagcccaggcaggagttcttcactgagctggtggagtgcgccaag
gccaagggcttcaccatagacacacgctctaacaagtccctggcagactccctggacagg
gctgtggaccctgctgacccgctcgtcaataagctcctgcgcttcatggctacacaggcc
atgtctaacgccctgtacttctccaccggagcgtaccctgaggaggaatactatcactac
ggcctggctctcgagcggtacactcacttcacctccccgatccgacgctacgccgacact
gtggttcacagactgctgatggcggccattctgagagataagggggcggagctccgggag
accccagccagtaacaaagagctggaggagctggctcagcatatcaacagcaagaacaag
gctgctcagcatgcacagaagcagtccacagaactgttccagtgcatgtacttcaaagat
aaggaccctgtaacagacgagcgctgcattgcagatgctgtgatctattcaatacgggct
aatggcttgcttgtttttgttccaaggtatgggattaaaggagctgtctatctgaaaaac
aaggagggcctggtggtgtgtgtgaatcctgatggaagctgcgagtggaagcccggaact
ctcaagagattccaggacaggatcagctcgaccacagcagacgggtcagagaccttctcc
ttgttccagcacatcactgtgagaatatccgtgcaggcatctcgatcccattcggaaagc
atcagaatggaaataattagcaacaaacctcacaaggcgtcggacccacagctccactgc
gacactccgcaccctgccagagcggacctggtgagggaggtgattcgctctgcggaggag
gcacagcaggctgaagagcaggcgagcagggctgcagtggcaggggagaaccaggagtac
tgtcagactcagggaaagagcttgtactccctgctggaggagatcagagagctggccctg
ctggatgtctcagcggcttcacttacaccctga
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