Acipenser ruthenus (sterlet): 117429738
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Entry
117429738 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117429738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117429738
Enzymes [BR:
arut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
117429738
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117429738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf-WRNIP1_ubi
PRP21_like_P
BsuBI_PstI_RE
Topoisom_I
DUF4363
Motif
Other DBs
NCBI-GeneID:
117429738
NCBI-ProteinID:
XP_034758030
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All DBs
Position
19:complement(6154266..6164597)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSERNSPAKKRPRRSLSITKNKKSGKEVARPTAQKTASIVSFFNSTPPAKLACPMCGQMV
PRFWINEHIDKQCQKFTNDDGDDVIFVNSVSKNAFEKGSSQEAILKSPRSPEKVVDHRAS
SSSSPNRDAASECAVKDKQASPCFKNDFLSQKTEECTAKVVRTIHLGCLASKLSRKTQRQ
NSNQHSKEALPEAQKQVGSSSEGTGDSSLKENHCDEPLDVMPGCSSEDAKLRDLDMMELP
SQNKTERRILTEVLNAEVSESSSLPLAAPASRQPVSVSRLNKCKEMRTTVLMLLYWHTAA
VQLRPAVKEGDPKQNQQQVYLQIVSLKPTNQDENASAAISSMEISKFPGSAETDQLNNFD
TVDSQVDTGVTVKIDQGEGNRNLVQEASRLPYYLRNFLTVLQAVLENEDDRQLFNEDDIQ
SISLFQQLSAAGQKLYVRLFQRKLNWLKVNKLEYSEIGSDLAPVIKELVQNGFLQRESEL
QDISEVLELLSAPELKTLAKAFHLANPNGQKQQLVEGFLRLSRQRSLFSFSNKQPGTGAV
ILRRTKELAGVCVRVCKGPRAVFSRVLLLFSLSDSVEDEETGSGGQGQLYTVLMVIMGRM
SFPDYTVHRESKVFQDREDLIRYETAVHMLNDVTAAMLNGHWDEANLLFQTAKAAWQELS
TATELRCAHCMYYEELPVYLRCFTAGWVYTRILSREVEILQRLRMNEEAVEELQNLLSQS
TYCVDSRGRWWDRLALNLQQHLKRTEEAINCNKEGLSDPLVRTGHQLSLCQRAVRTRESL
SCKKFRHLLKDVPAIEVKDVTHVTIQGKLCPHAGMGKSVFLMEGAAQPRGGSREEGDXTA
TVMCFVEELALAHYHQQGFDQGIHGEGSTFFTLCSLLMWDIIFMDGIADVFRNPYQACPL
DLHTDCFYENRREPIESRLQLLQEASTETLQTLIADTWNSQHGKAAALVNWERFSSLQQA
QSLAVCFGGPFLSGVMRRMCKDYRHCRGGLPDLVVWETQNNTYKLVEVKGPNDRLSHKQM
IWLHELQQLGAEVEVCHVTAIGARSTRLT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgaaattccccagccaaaaagagaccgcgaaggagcctatcgattaccaag
aacaagaaaagtggcaaagaagtggcaagacccacagctcagaaaactgcttccattgtt
tcctttttcaacagtaccccaccagctaagcttgcctgccccatgtgtgggcagatggtg
ccgagattttggataaacgaacacattgacaagcagtgccagaaattcacgaatgatgat
ggtgatgatgtcatttttgtaaactctgtgagtaagaacgcttttgagaaaggctcaagc
caagaggccattttgaaatctccaagaagccctgagaaggtcgtggaccacagggccagt
tcaagttcaagtccaaaccgagatgctgcctctgagtgtgctgtcaaggataaacaggct
agcccctgttttaaaaatgattttctttcacagaaaacagaggaatgtacagctaaggtt
gttcgaactattcatctaggatgcctggcttcaaagttatcaagaaagactcaaagacaa
aactccaaccaacactccaaagaagctttgccagaagcccaaaaacaggttggcagctct
tcagaagggactggtgacagctctctgaaagaaaatcattgcgatgagcctttagatgta
atgcctgggtgctcctcagaggacgctaaattgagagatcttgatatgatggagttgcct
tcacagaataaaactgaaagaaggatcctaactgaagtgctgaatgctgaggtgtctgag
tcatcttcgttaccattagcagctccagcttcacgtcagccggtcagtgtatcccgattg
aacaagtgcaaagaaatgcgaacaacagttctgatgcttctgtattggcacacagcagca
gtacagctgagaccagctgtaaaagagggcgatccgaagcaaaaccagcagcaggtttat
ctgcaaatagtgagtcttaaacctactaatcaggatgaaaatgcttctgctgcgatatcg
tctatggaaatctcaaagtttcctggttctgcagaaactgatcagttgaataactttgac
acagttgacagccaggttgatacaggggtaacagtcaagatagaccaaggagagggtaat
aggaaccttgttcaagaggcctccaggctcccttattacctccgcaacttcctgacagtg
ctacaggcagtgctggagaacgaggacgacagacagctcttcaatgaagatgacatccag
agcatcagcttgtttcagcagctatcagctgcgggacagaagctgtatgtgaggctgttc
cagaggaaactgaactggctgaaagtgaataagcttgagtactctgagattggttctgac
ctggcacctgtaatcaaagaacttgtacaaaatggctttctgcagagagaatccgagctg
caggatatctccgaagtcctggagttgctttctgcccctgaactgaagactctggcaaag
gcttttcacctggccaaccccaacgggcagaagcagcagctggtggagggcttcctgcgg
ctgtccaggcaacgctcgctcttcagcttcagcaacaagcagcctggcactggggcagtg
atcctgaggaggactaaggagctggcgggcgtgtgtgtgcgggtgtgcaaggggccccgc
gctgtcttctcccgggtcctgctcctcttctctctctcagactccgtggaggacgaggag
acgggcagcgggggccagggccagctctacaccgtgctcatggtcatcatgggccgcatg
tccttcccagactacaccgtccacagggaaagcaaggtcttccaggacagggaggatctc
atcaggtatgagacagcagtgcacatgctgaatgacgtgacggctgccatgctgaacgga
cactgggacgaggcgaatctgctcttccagactgctaaagctgcctggcaggaactgagc
acagcgactgagctgaggtgtgctcactgcatgtactatgaagagctgcctgtgtacctg
cgctgcttcactgccggctgggtctacacccgcatcctctcccgggaagtggagattctc
cagaggctgcgcatgaacgaggaggctgtggaagagctgcagaatctcctgtcacagtct
acctattgtgtagacagcagggggcgctggtgggaccgcttggctctcaatttacaacaa
catctgaaacgcacagaggaggcaattaattgcaacaaagaagggctgtccgatccactg
gtacgaacagggcatcagctgtctctgtgccagcgagcagtgaggacgagagagtctctg
agctgcaaaaagttcagacatcttctgaaggatgtgccagctatagaagtgaaggatgtc
actcatgtgacaatccaagggaagttgtgccctcatgcagggatggggaagtctgttttc
ctgatggagggggcggcccagcccagagggggaagcagggaagagggtgactaaactgcc
acggtcatgtgcttcgtggaggaactggcactggctcattaccaccagcagggcttcgat
caggggattcatggagaggggtctacgtttttcacactatgcagcctcctaatgtgggat
atcatattcatggatgggatagcagatgtttttagaaatccctatcaggcgtgtccgctg
gaccttcacaccgactgtttctatgagaacaggagagaaccgatagagtcccggctgcag
ctgcttcaggaggcctccacagagaccctgcagactctcattgccgacacctggaactcc
cagcatggaaaggcagctgcgctggtgaactgggagcgattctcgtcactacagcaagcg
cagagtctggctgtttgctttggaggccccttcctgagtggggtgatgagaaggatgtgt
aaagattacaggcactgcagaggaggactccctgacctggtggtgtgggagactcagaac
aacacctacaagttggtggaagtgaaaggcccaaatgaccggttgtcccacaaacagatg
atctggttgcatgagctacagcagctgggagcggaggtggaagtgtgccatgttactgcc
attggagcccggagcacacgactaacctga
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