Acipenser ruthenus (sterlet): 117430287
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Entry
117430287 CDS
T07327
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117430287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117430287
Membrane trafficking [BR:
arut04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117430287
Protein recycling
Other Rab GTPase associated proteins
117430287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
BAR
RecG_N
TruB-C_2
CAS_CSE1
CID_GANP
Motif
Other DBs
NCBI-GeneID:
117430287
NCBI-ProteinID:
XP_033906060
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All DBs
Position
20:28911957..28929183
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AA seq
532 aa
AA seq
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MTKMSQKSERRGIRVDQSELLCTKGCGYYGNPAWQGFCSKCWREEYHHVRQKQIKEDWAL
AERLQREEEAAYASSQGAQSQPSLTPFSKFEEKKSNEKTRKVTTVKKFFSPSSRIGSKKA
APETAGKCVPSGRERHADTLLRDLREIFTPPWDLASPTEALAARLRESHETKAPSPSISR
QASIETDQVSRDFIDFLKSLHKPGREIHKQCRAFIETMATKEDHQSVEELSECVQDFYQN
MSDRLLTHFKGSSERVERVMDQVEKYIMTRLYKNVFCPEITDDEKKDLAVQKRIRALHWV
TIQMLCVPVDEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKDIFNAIKITRNE
PASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEK
LDAQSLNLSPEDFERYMTGQASPCRQDPEGLSQVYQSLELLSGLGERQERVLDGARRLES
DLIDWQDGVAREVQDILDKYPLEIRPPASAIDSDNVENDRLPPPLLPQVFAG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatgagtcagaaatcggagcgcagagggatccgcgttgaccaatcagagctg
ctgtgtacaaaaggatgcggttactacggcaaccccgcctggcaaggcttctgctccaag
tgctggcgtgaggagtaccatcacgtccgtcagaaacagatcaaggaggactgggcgctg
gcagagaggctgcagagggaggaggaggcagcctatgccagcagtcagggagcgcagtcc
cagccttccctcacacccttctctaaattcgaggagaagaagagcaacgagaagacccgc
aaagtcaccaccgtcaagaaattcttcagcccctcgtcccggattggatccaagaaagcg
gccccggagacagctgggaagtgtgtcccgagtgggagggaacgccatgccgacaccctc
ctcagggacttgagggagatttttaccccaccctgggacctggcttcccctactgaagcc
ctggctgccagactgagagagagccatgagacgaaggcccccagcccgtcaatcagcaga
caggccagcatcgagacagaccaggtctcccgggacttcatcgacttcctgaagagcctg
cacaagccgggccgcgagatccacaagcagtgccgggccttcatcgagaccatggccacc
aaggaggaccaccagagcgtggaggagctgtccgagtgtgtgcaggacttctaccagaac
atgtcagacaggctgctgacacacttcaaaggctcctccgagcgggtggagagggtgatg
gaccaggtggagaagtacatcatgacccgcctctacaagaacgtcttctgccctgagatc
acggacgatgagaagaaagacctggctgtgcagaaacgcatcagggctctgcactgggtc
actattcagatgctgtgcgtcccggtcgatgaagagatccctgaagtgtctgacatggtg
gtgaaggccatcacagatataatcgagatggattcgaagcgtgtccccagggacaagctg
gcctgcatcaccaagtgcagcaaggacatcttcaacgccatcaagatcacgaggaacgag
cccgcctcggccgacgacttcctgcccaccctcatctacatcgtgctgaaggccaacccc
ccgcggctgcagtccaacatccagtacatcacccgcttctgcaaccccagccgcctcatg
acaggagaggacgggtactactttaccaacctgtgctgtgccgtggccttcatcgagaag
ctggatgcccagtcgctgaacctcagcccggaggatttcgagcgctacatgactggccag
gcgtctccgtgcaggcaggaccctgagggcctgagccaggtgtaccagagcctggagctg
ctgagcgggctgggggagcgtcaggagagggtgctggatggggcgcggaggctggagagc
gacctcatcgactggcaggacggcgtggcccgggaggtgcaggacatcctggataaatac
cccttggagatccggccgcccgcctccgccatcgactccgataacgtggagaacgaccgc
ctgccgccccctctgctgccacaggtcttcgctggctag
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