Acipenser ruthenus (sterlet): 117430302
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Entry
117430302 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117430302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117430302
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117430302
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117430302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
SID-1_RNA_chan
zf-ANAPC11
ECSCR
DUF6249
Motif
Other DBs
NCBI-GeneID:
117430302
NCBI-ProteinID:
XP_034758509
LinkDB
All DBs
Position
20:complement(27306000..27392860)
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AA seq
804 aa
AA seq
DB search
MTVPQRQLAGLWPWLLMAALQVVLGQTGLELAAAAAASERSATKAVIKVTLLKPDSAGKS
YMEVEGVFAGSNGRGSTEGKLMQSHPLSLCNTSDDEQQEALFISIVKLESPDRELHPCLS
LLKKARLALDRGAQAVIFDVTDDATAAEKLRQSDDLLKPVVLVQAKDAETLMELVNNNQE
ATVQIDVRLEQEGQHYDVGILLTVVTALLVIILIFAFRFRCRQNRNRDSMQQQTIRAISR
LQTRMYKSQCRSGSQRSRGKWDSASSSNSSPVCVICLEEFADGQNLRVISCFHEFHKKCV
DPWLLQHRTCPLCLHNIMEAESMPGQITPGRHLQQHPSAIPLRPYPHSAPRQPTHMGRYF
PPPPLDPATVRYLPNRQLVPVLQRCSYSHGEGLPIRQYTNMCCRPPFPPEQHYQGRPCAP
LHRSAWSAPRSAPNSRHHSRGGGHSRQDDGSCSGGSFRTEKSGYLADGPGSDSSSGPCHG
SSSDSVLNCTDVSLQAVYGSWSTFRSSLSSDYDPFVYCGESGGGMESGGRPRSLDSMVNR
TGSCPEEQVFNHVHFHRHRHHHYGEGRSSDHRPARSSDRELCTSESPVTDGLQSRVGEVH
HCQPKSCSEGQHDAPSLCPCPKAGHDPSESPAPRAVEEGRDAEENGQAPAMLPLPCCHHR
SCDFNSRHHHRRKKSICHHDPPPPMVQFHQSVDMQEDCSIHIHYGHVSGYPPDNQPLVPV
PLILDSTEAGDWPCCSGHHVVWQRQLQQAGSEPLLEAPRPPEERDQSRGGSGPKPAQEDC
LYCPDSLSNQGSEEEAETMGQHTV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcctcagcggcaactcgccgggctctggccgtggctgctaatggcggccctt
caggtagtgctcgggcagacaggactggagctggcggcggcggcggcggcgtcggaacgg
tctgcgaccaaagctgtcatcaaagtgacacttctcaaaccagactcggcggggaagtct
tacatggaagtggagggggtgttcgcgggaagcaacggaaggggttcaaccgaagggaag
ctgatgcagtcccacccgctgtccctgtgtaacacgagcgacgacgagcagcaggaggcg
ctgtttatcagcattgtcaagttggagagtcctgacagagagctgcatccctgcctgtcg
ctgctcaaaaaggcacgcctggcattggatcggggagctcaagctgtcatcttcgacgtt
actgatgatgcaacagctgctgaaaagctgcgtcagtctgatgatctgctcaaaccggtg
gtgctggtccaggccaaggatgccgagaccctcatggagctcgtcaacaacaaccaggag
gccacagtgcagatcgatgtccggctcgagcaggaagggcagcactatgatgttgggatc
ctcctcactgtggttactgccttgctggttatcatcctgatttttgcctttcgcttcagg
tgtagacagaacaggaacagggattccatgcagcagcagactatccgtgccatcagccgt
ctgcagacccggatgtacaaatcccagtgccgctcggggagccagaggtcaaggggcaag
tgggactccgccagcagcagcaactccagccctgtgtgtgtcatctgcctggaggagttt
gccgatggacagaacctgcgtgttatttcgtgctttcatgagtttcacaagaagtgcgtg
gacccctggctgctccagcatcgtacctgcccgctctgcctgcacaacataatggaggca
gaatctatgcccggacaaatcacccctgggagacacctgcagcagcacccctctgccatc
cccctgcggccctacccccactcagccccaaggcagcccacccacatgggccgctacttt
ccacctcctcctttggaccctgccactgtcaggtatctgcccaacagacagctggtacca
gtccttcagaggtgcagctacagccacggcgaggggcttccaatcaggcagtacaccaac
atgtgctgcaggcccccttttccacctgagcagcattatcaaggcaggccctgcgcccct
ctgcaccgatcagcctggtcagccccacgcagtgcccccaactcccggcaccacagccga
gggggtgggcacagccggcaggacgacgggagctgctcggggggcagctttcggacagag
aagagcggctacctggctgacgggcctggcagtgactccagctcagggccttgtcacggc
tcctccagtgactctgttctcaactgcaccgacgtcagcctccaagccgtctacgggagc
tggtccaccttccgcagctccctgagcagtgactacgatccctttgtctactgcggtgag
agtggaggaggaatggagagcggaggcagacccaggtctttggactccatggtcaatcgg
actggttcctgcccagaggagcaggttttcaaccatgtccacttccaccgacacagacac
caccactatggagagggccggagcagcgaccataggcctgccaggagctccgacagggag
ctgtgtacctccgagtctccagtcacggacggtttacaatccagggtgggtgaagtgcac
cactgccagccaaaaagctgctctgaagggcagcacgacgcacccagcctgtgtccttgt
cccaaagccgggcatgacccttcggagagcccagcaccaagagcagtagaggaggggcga
gatgcagaggagaatggacaggctcctgccatgctgcctctgccctgctgccaccacagg
agctgcgacttcaacagccgccaccaccaccggaggaaaaagagcatctgtcaccatgac
ccgccgccacccatggtgcagttccaccagagcgtggacatgcaggaggactgcagcatc
cacattcactatggccatgtctcaggataccccccggataaccagccgctggtgccggtc
cctctcatcctggactctacagaggcaggggactggccctgctgctcagggcaccacgtc
gtgtggcagcggcagctccagcaggcagggtcagagcccctgctggaggcgcctagaccc
cctgaggaaagggatcagagcaggggggggtcggggcccaagccagcacaggaagattgt
ttatactgcccagactcgctcagtaatcagggatcagaagaggaggccgagacgatgggt
cagcacacagtgtaa
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