Acipenser ruthenus (sterlet): 117430350
Help
Entry
117430350 CDS
T07327
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04142
Lysosome
arut04144
Endocytosis
arut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117430350
04142 Lysosome
117430350
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117430350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117430350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117430350
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117430350
Exosome [BR:
arut04147
]
Exosomal proteins
Proteins found in most exosomes
117430350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
117430350
NCBI-ProteinID:
XP_034758490
LinkDB
All DBs
Position
20:26077618..26113290
Genome browser
AA seq
1676 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGDQAQVVIIDMNDPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPMKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPAG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENLIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVKGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLVEHLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSSYMEVVQ
AADESGNWEDLVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVG
DRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD
GNEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAI
LYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEFDNAIITMMNHP
TDAWKEGQFKDIITKVANVELYYKAIQFYLEFRPLLLNDLLMVLSPRLDHSRAVTFFSKV
KQLPLVKPYLRSVQNHNNKAVNEAVNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLEKH
ELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLLEGK
KECFASCLFTCYDMLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLDASESLRKE
EEQATETQPIVYGQPQLMLTAGPSVAVPPQQAYGYGYTAPTGFGQAPPQPGFGYGM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcccatccgcttccaggagcacctgcagctccaaaacctgggcatc
aacccagcaaacattgggttcagcaccttaaccatggagtcggacaagttcatctgcatc
cgagagaaggttggggaccaggcccaggtggtcattattgatatgaatgatcctaacact
cctattcgccgccccatctctgctgacagcgctattatgaaccctgccagcaaagtcatt
gcactgaaagacgctgcaaaaactcttcagatttttaacattgagatgaagagcaagatg
aaggctcacaccatgactgatgatgtcaccttctggaagtggatctctctgaacacggtt
gctctggtaacagacaacgcagtgtatcattggagcatggagggagattcccagccaatg
aaagtgtttgaccgacattccagtcttgcaggctgccagataatcaactaccgcactgat
gccaagcagaagtggctgcttctcattggcatttcagcacagcaaaaccgtgttgtgggt
gcaatgcagctttactctgtggacaggaaggtgtctcagcccattgaggggcatgcagct
ggctttgctcagtttaaaatggaagggaacgcagaggagtccactctcttttgttttgct
gttagaggacaagctggaggaaagttgcatatcattgaagtgggcacaccaccagcaggg
aaccagccatttccaaagaaagcagttgatgtcttcttcccgcctgaggcacagaatgac
tttcctgttgcaatgcagataagttcaaagcaagatgttgtctttttgatcaccaaatat
ggttacatccacctgtatgacttggagacaggcacctgtatctacatgaacaggatcagt
ggagagactatctttgttactgcaccccatgaagctactgctgggattattggagtcaac
aggaaaggacaggtgttgtccgtgtgtgtcgaggaagagaacctcattccctacattacc
aatgtgctgcagaaccctgacctcgccctccgcatggccgtccgcaacaacctggccgga
gcggaagaactgtttgcccggaaattcaacaacctctttgcccagggcaactactcagag
gcagctaaagtagccgcaaatgcaccaaagggaatcctgcgcactccggacaccatccgt
cgttttcagagtgttcctgctcagcctggtcagacctctccgttgcttcagtactttggg
atcctgctggatcagggccagctcaacaagtttgagtctttggagttgtgccggccagtg
cttcagcagggtcgaaagcagttgctggaaaagtggctaaaagaggacaagctggagtgc
tctgaagaacttggcgatcttgtgaaatctgtggacccaactcttgccctgagtgtctat
ttgagggctaatgttcccaacaaggtcatccagtgttttgctgaaacagggcagttccag
aaaattgtactttatgcgaagaaggttggatacactcctgattggatcttcttgctcagg
aatgttatgaggatcagtccagagcagggactgcagttctctcagatgctggtacaagat
gaggagcccctggcagacatcacacagattgtcgatgtgttcatggaatacaacctgatc
cagcagtgcacctccttcctgctggatgcgctcaagaacaatcgtccctcagagggccct
cttcagacacgcctgctcgagatgaacctcatgcatgccccacaggttgcagatgctatt
ctgggtaaccagatgttcactcactatgaccgggcccacattgctcagctgtgtgagaaa
gctggcctgctgcagcgagccttggaacactacacagatctgtatgatatcaaacgagct
gttgttcacactcaccttctcaaccccgagtggctggtgaacttctttggcgccttatca
gttgaggactccctagaatgcttgagggccatgctgtctgctaatattcgtcagaacctg
cagatttgtgtccaagtggcgtccaagtaccatgagcagctctccactcagtctctcatt
gagctttttgagtctttcaagagtttcgaaggactgttttatttcctgggttcaattgta
aacttcagccaggacccagaggttcacttcaagtacattcaggctgcctgtaagactggg
cagatcaaagaagtggagagaatttgcagggaaagcaattgctatgaccctgagcgtgtg
aagaacttcttgaaggaggccaagctgacggatcagcttccactaatcattgtgtgtgac
cgatttgactttgtccacgatttggttttgtacctgtaccgaaacaacctgcaaaaatac
attgagatctatgtgcaaaaggtgaaccctagccgtctccctgtggttattggagggttg
ctggatgtggattgttctgaggatgtcattaagaacctcattctagttgtgaagggacag
ttctccactgacgagctggtggctgaagttgagaaacgaaaccggttgaagttgctcctg
ccctggttagaagcccgcatccacgaaggctgtgaggaacccgcaactcataatgctttg
gccaaaatctacattgacagtaacaacaaccctgagcgctttctccgtgagaatccattc
tatgacagccgtgtggtgggcaaatactgcgagaagagagaccctcatttggcttgtgtg
gcttatgagcgtggccagtgtgaccaggagctcattaatgtatgcaatgagaactccttg
tttaagagcctgtcacgttaccttgtccgccgaaaggaccctgaactttgggccagtgtg
ctgctggagagcaacccattcaggaggccacttattgaccaggttgtgcagactgccctg
tctgaaacacaggacccagaggaggtgtccgtaactgtcaaagccttcatgacagctgat
cttccaaatgagctcattgaactgctggagaaaattgttctggacaattctgtattcagt
gagcacagaaaccttcagaatctgttgatccttactgccatcaaagcagaccgtacccgt
gtcatggaatacattaaccgcttggataactacgatgcccctgatattgctaacatagcc
attagcaatgagctctttgaagaagcttttgccatcttcagaaagtttgatgtgaacaca
tctgcagtccaggtattggttgagcatctggatcgggcctatgaatttgctgaacgctgc
aatgagccagctgtgtggagccagcttgctaaagctcagctgcaaaagggtttggttaag
gaagctattgactcctatattaaggctgatgatccctcatcctacatggaggttgtacag
gcagctgatgaaagtggaaactgggaggatctggtgaaatacctccagatggctcggaag
aaggcacgcgagtcctatgtggagactgaactcatctttgctttggcaaaaaccaaccgt
ttggcagaactggaggagtttatcaatgggcccaacaacgctcatatccaacaagtgggt
gatcgttgctatgatgagaaaatgtatgacgcagctaagttgctctataacaatgtgtcc
aactttggccgattggcatcaacactggttcatctgggggaataccaagctgcagtagat
ggtgccagaaaggcaaacagcactcgtacatggaaggaggtttgcttcgcttgcgtagat
ggtaatgagttccgtctggcgcagatgtgtggtcttcacattgttgtccatgccgatgaa
ctggaagagctgattaactattatcaggaccgtggctactttgaggagctgatcacaatg
ttggaggcagctctgggtctagagcgtgctcatatgggaatgtttactgaactggccatc
ctgtactccaaattcaagccgcagaaaatgagggaacacttggaactcttctggtccaga
gtcaacattccaaaggtgctgagggctgcagagcaggcacatctgtggggagaactggta
ttcctttatgacaaatatgaagagtttgataatgctatcatcacaatgatgaaccaccca
acagatgcctggaaagagggacaattcaaggacatcattaccaaggtggccaatgtcgag
ctgtattacaaggcgatccagttttacttggagttcagacccctgttactgaatgatctt
ctgatggtgctatcccctcgacttgaccattcacgagctgtcaccttcttctccaaggtt
aaacagcttccactggtcaaaccatacctgagatctgtacaaaaccacaacaacaaggca
gtaaatgaagcagttaacaatctctttatcatagaggaagactaccaggccctccgtaca
tccatagatgcttatgacaactttgacaacatttccctggctcaacgcctcgagaagcac
gagctaattgaattcaggagaattgctgcttacctcttcaaaggcaacaatcgctggaaa
caaagtgtggagctctgcaaaaaggataaactttacaaggatgcaatgcagtacgcctca
gaatcaaaagacacagagctagcggaggagctgctgcagtggttcctgctggagggaaag
aaggaatgctttgcctcttgcctgttcacctgttacgacatgctgaggcctgatgttgtc
ctggaaaccgcatggaggcacaacatcatggacttctccatgccctactttatccaggtc
atgagggagtacctttcgaaggttgataaacttgatgcttctgaatctctgaggaaagaa
gaggaacaagcaacagaaacgcaacccattgtttatggtcagccacagcttatgctcaca
gcaggaccaagtgttgctgttcctcctcagcaagcttatggctatggctacacagcacca
accgggtttggacaggcacccccccagcctggctttggctacggcatgtaa
DBGET
integrated database retrieval system
