Acipenser ruthenus (sterlet): 117430428
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Entry
117430428 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117430428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117430428
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117430428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
New_glue
Exonuc_VII_L
Serinc
TFIIA
DUF4179
Motif
Other DBs
NCBI-GeneID:
117430428
NCBI-ProteinID:
XP_034758557
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Position
20:complement(6778529..6784532)
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AA seq
648 aa
AA seq
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MSGFNFGASSGGFNFGTTKTTAGGTAGFSLTGASTTGNTGGGFSFGTPSQPQAAAQPSSL
FSMATPASSGTQTGFSFGAQATSTPAAAAAPVQTTGGGFSFGAGAPKINLAMPNPTQALT
SAGLTLGNSMAAPTGTGFSLGGALSTQSTAAPSGGGFSFGASGSLGGAMTAAATAAAAAT
TTAATAAAATTTAAQQQQLQQQQQQLQQQQQQQQLQQQQQQLQQQQQQQPAASGFSLGGS
AAAQPTSGFSFGAAKVQVTTTAPSATGGGFSFGNSTALATSQPAATLSLGAPATGLTLGS
LVPASTAAAASGTTTQGTGMLFGAKPQALASAAPTTTLASTSLGSSLFASPAPVSSAPSS
FTLGSTASPTATSSAAAAGGGLGFMQKPLGVTTAASTALSAAAPTGAVTGFSLGMKPAGL
GAIGTTAPPATTTITATAASTASVPPVMTYAQLENLINKWSLELEDQERHFLQQATQVNA
WDRMLIENGEKITSLHREVEKVKLDQRRLDQEMDFILSQQKELEDLLTPLEESVKEQNGT
IYMQNADEEREKTYKLAENIDAQLKRMSQDLKEIIEHVNTSSSSSETSDPVSGGFNLLQI
CKILNAHMDSLQWIDQNSVLLQRRVEEVSKLCEGRRKEQEKNFRIAFD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatttaattttggtgcctcctctggtggctttaacttcggtaccaccaagacg
acagcggggggcactgctgggttttcactgactggagccagcaccactggaaatacaggg
ggtgggttctcctttgggacaccttcccaaccccaggctgctgcccagccctctagtctc
ttctccatggctactcctgcaagctctggtacacaaacaggattcagctttggagcccaa
gccacttcaacaccagcagcagcagcagcacctgtccagaccactggaggggggttctca
tttggtgccggcgctccaaagataaaccttgccatgccgaatcccacccaggccttgacc
tctgctggtctgaccctgggtaacagcatggcagcccccacaggcacagggttctccctt
gggggagcactgtctacccagagcacagcagccccttctggaggagggttcagctttggt
gctagtgggagcctagggggtgccatgacagcagcagcaacagcagcagcagcagcaact
acaacagcagcaacagcagcagcagcaactacaacagcagcgcagcagcagcaactacag
cagcagcagcagcaactacaacagcagcagcagcagcaacaactacaacagcagcagcag
caactacagcagcagcagcaacaacaaccagcagccagtggattctcccttgggggtagt
gctgctgcccaacctacttctgggttttcttttggggcagcaaaggtgcaggtgaccaca
acggcccccagtgcaactggtgggggattctcatttgggaatagcactgcccttgcaacc
agccaacccgcagctacactttcccttggtgctccagcaacagggcttactttgggatcc
ttagtaccagcttcaactgcagcagcggcctcagggaccacaacccaggggacaggcatg
ttatttggagccaaaccccaagccctagcgtccgctgcccccaccaccaccctggccagc
acatcattagggtcctctctcttcgcttcaccagcccccgtctcatcagctccctccagt
ttcacacttgggtctacagcctcccctacagctacttcttcagcagcagcagcaggagga
ggattggggttcatgcagaagcctctgggggtcaccacagcagccagcactgctctttca
gctgctgcccccacaggtgctgtcaccgggttttccctcggaatgaaacctgcaggattg
ggcgctattggcaccacagctccccccgccaccaccaccatcacagcaactgcagcctca
acagccagtgtccccccagtaatgacatatgcccagctggagaacctgataaacaagtgg
agtctggagctagaagaccaggagaggcacttcctgcagcaggcaacgcaggtcaatgcc
tgggaccgcatgcttattgagaacggagagaagatcacatctctacacagagaggttgag
aaagtgaagcttgaccagcgaaggctggaccaggagatggatttcatcctgtctcagcag
aaagagctggaagatctgctgacacccctggaggagtctgtgaaggagcagaacgggacc
atctacatgcagaatgcagacgaggagcgagagaaaacgtacaagctggcagagaacata
gatgcccagttgaagagaatgtcccaggacctgaaggaaatcattgaacacgtcaacaca
tccagcagctcctctgaaaccagtgacccggtatccgggggatttaatcttctgcaaatc
tgcaaaattctgaatgcacacatggattcacttcagtggatagaccaaaattcagtgttg
ctgcagaggcgagtggaagaggtgtccaagctctgtgaaggtcgtcgcaaggaacaagaa
aaaaactttcggattgcatttgattaa
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