Acipenser ruthenus (sterlet): 117430616
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Entry
117430616 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117430616
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117430616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
117430616
NCBI-ProteinID:
XP_034758823
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Position
20:6350244..6373371
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AA seq
1595 aa
AA seq
DB search
MKMHRRILGHLSSVYCVAFDRTGKRIFTGSDDCLVKIWATDDGRLLSTLRGHAAEISDMT
VNYENTMIASASCDKIIRVWCLRTCAPVAVLQGHTASITSIQFSPATKGTTQYLTSTGAD
GTVCFWQWQSHSMKFNERPFKFTERSRPGVQISCSSFSCGGMFLATGSTDHVIRVYYLGS
QSPEKVAELEAHTDKVVAVQFCNNSDSLRFVSGSRDGTARIWHYQQQEWKSTALDMTAKL
PGSNVVPGEDKVTKLNVTMVTWDRADSTVITAVNNYLLKVWNPSTGQLLHVLSGHDDEVF
VLEAHPYDSRIMLSAGHDGNIFIWDLSKGTKIRNYFNMIEGQGHGAVFDCKFSSDGQHFV
CTDSHGHLLIFGFGCSRSYEKIPDQMFFHTDFRPLIRDSNNYVLDEQTQQAPHLMPPPFL
VDVDGNPHPTLYQRLVPGRENCNEEQLIPQLGYLANGDGEVVEQVIGQQTAAQPEESPLD
GLIRQLQQEHNQREEPAEQDQGEEPGDSHPGDPRSPALMGSPPNVGLRRSGQIEGVRQMH
NNAPRSQMATERDLMAWSRRVVVNEMQPGVSRVMEECRAAKGEAEYTLYALERRKKPSHS
VQRSEQQVGSLRSLRRTQRKRQHAYQTRSAIDHPPLDRAQNSQSDEESESSPEQDDEVLD
ASNVSSDEGEPEWQSDSSSSCFSDSSSEYSDWTADAGINLQPPKRQTRQAVRRVRSSSEE
EDEDHGKERKRPEKRKKPKQTKRKKPNESLAMAGDTGDEWLPPQWIMDTIPRRSPFVPQM
GDEVIYFRQGHEAYVRAVRRSKSYSINPQKQPWNKMDLRDQESVKVVGIKYEVGPPTLCC
LKLAFLDPVSGKMTGESFSLKYHDMPDVIDFLVLQQFYNEAKEQNWQCGTKFRSIIDDAW
WFGTVESQQPFQQEYPDSLFQCYTVQWDNGEREKMSPWDMDPIPDEAPLPDAVGDGVPVT
EEELKALLYSPQEGEWGARTRDEECERVLRGIDDLLTLDIAKAFTSPVDLRDYPLYCTVV
AYPTDLGTIRKRLENQFYRRISALMWEVRYIEHNSRTFNEPESPIVASAKIVTDVLLRFI
GDQSCMDILELYNKVKTELSSADEEEEEADVDVDSDTPGTSTGQKSTPKYSKRQISRLDV
GAWKEQCQELLNRMFEREDSEPFRQPVDLFAYPDYRDIIDTPVDLSVVSETLAAGNYENP
MEFSKDVRLIFSNSKAYTPNKKSRIYSMTLSLSASFENQILPIISDYKSAVQGQRRSRQR
MSYRKRLKSSSSSPSTSQASSPKGKHKQARTQPKSTPNTSLSLTRTSSTRSSQASETTED
PSRSVMGEDENEDEDSQPSSTSSITASRSGGAGAERVTRSRATPSKRVPSPNGPLTNGGN
WPLCASAKRKLAVDSDTSDIEKPEGTESSLSTSSLSSSSSSSSSSSSSSGSSSSGSSSSS
SEGSESDQEFIDGGDHDYSKAIRPRLTRKTKKAARPVSANXEEKEREPARGRQASRRKRP
RLMEDEEEQEGGEEEEEEEQELELEKVRGTRKSAVKESRINTRNQGRRTVLYNDDSEDDT
SVPAEDPLNLGMSRSGRVRKMTEKARVSHLMGWNH
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaccggaggattctgggacatctgtcttcagtgtactgtgtggccttcgac
cgaactggcaaaagaatctttacgggttcggacgattgcctggtcaagatctgggctacg
gatgacggccggctcctctcgaccctccgaggtcacgctgccgagatttcagacatgacc
gtaaactacgagaacacgatgatcgcttctgccagctgcgacaaaatcatccgcgtgtgg
tgcttgcggacgtgcgcgcctgtggctgtgctgcagggccacacggcgtccatcacctcc
attcagttctctccggcaacaaaaggaacaactcaatacctcacatccactggggctgac
ggcacggtctgcttctggcagtggcagtcccacagcatgaaattcaacgagcgtccattt
aaattcacagagaggtccagacctggagtccaaatctcctgttcttccttcagttgcggg
ggaatgttcctggcgacgggcagcacggatcatgtgatcagggtctactacctgggctca
cagtctcctgagaaagtggctgagcttgaggcacacacggacaaagttgtggcagtgcag
ttttgtaacaacagcgacagcctgcggtttgtcagtggcagtagagacggcacggcacgc
atttggcactaccagcagcaggagtggaagagcacagccctcgatatgactgccaagctg
ccaggaagcaatgtggtgccaggggaggacaaggtgacaaagctgaacgtgacgatggtg
acctgggaccgagctgacagcactgtcatcactgctgtcaacaactacctgctcaaagtg
tggaacccatctaccgggcagctactgcacgttctctcggggcatgatgatgaggtattt
gtgttggaagcccatccctatgactccaggatcatgctgtctgcagggcatgatgggaac
atttttatctgggacctgtccaagggcactaagattcgcaactacttcaacatgattgaa
ggtcagggtcacggcgctgtgttcgactgtaagttctcctctgacgggcagcactttgtt
tgcaccgactcccacggtcacctgctcatattcgggtttggctgcagcaggtcctacgag
aagattcccgatcagatgtttttccacacggatttccggcccctgatcagagactcgaat
aactatgtgctggacgagcagacccagcaggcaccgcacctgatgcccccgcccttccta
gtggacgttgatggaaacccccacccgacactctatcagcgcctagtgcctgggagggag
aactgcaacgaagagcagctcatcccacagctgggttacctggccaacggtgacggtgag
gtggtggagcaggtgattggccagcagacagccgcacagccggaggagagccctctggac
gggctgattcgacagctacagcaggagcacaaccagagggaggagcctgccgagcaggac
cagggagaggagcctggagacagccaccccggggacccgagaagcccggctttgatgggc
tcccctcctaatgtgggtctgaggcgcagcgggcagatcgagggggtccggcagatgcac
aacaacgccccccgcagtcagatggcaaccgagagggacctgatggcctggagtcgcagg
gtagtggtgaacgagatgcaaccaggggtcagcagggtcatggaggagtgtcgggcagca
aaaggagaggctgagtacactctgtatgctttggagaggcggaagaaaccatcccactca
gtgcagaggagcgagcagcaggttggcagcttgcgctccctgagacggacacagcgcaag
cggcagcacgcttaccagacccgctccgccatagaccaccccccactggacagagcgcag
aattcccagtcggatgaggaatcggaaagctccccagagcaggacgacgaggttttggac
gccagtaatgtctcttcagatgagggagagccggagtggcagagtgacagcagctccagt
tgttttagcgactcctccagcgagtactcggactggacggcggatgcagggatcaacctg
cagcctccgaagaggcagacgaggcaggccgtgaggagggtccgcagcagctcggaggag
gaggacgaggaccacggcaaggagaggaagaggccggagaagcgcaagaaacccaaacag
accaaacggaagaagccgaatgagtcgctggcaatggctggagacactggcgatgagtgg
ctgcccccgcaatggatcatggacaccattccacgcaggtctccctttgtgccacagatg
ggagatgaggtgatctatttccgccagggtcatgaagcctatgtgagagcagtgcgcagg
tccaaatcctacagcatcaacccccagaaacagccgtggaacaaaatggatctccgggac
caagaatctgtgaaagttgtcgggatcaaatatgaagtgggaccgcctacactgtgctgc
ctgaagctggcgtttcttgatccagtctctggaaagatgaccggggagtccttctcttta
aagtatcacgacatgccagatgttattgacttcttagttctgcagcagttttacaatgag
gcgaaggaacagaactggcagtgtgggaccaagttccgcagtattatcgatgatgcctgg
tggttcgggacagtggagagtcagcagcccttccagcaggagtatccagacagcctgttc
cagtgctacactgtccagtgggataacggcgagcgggagaaaatgagtccctgggacatg
gatcccattccagatgaagcgccgttgccagatgcagtgggggatggggtgccagtcacg
gaggaggagctgaaggccctgctctacagccctcaggaaggggagtggggggctcgcacc
cgtgacgaggagtgtgagagggtcctccggggcattgatgatctcctcaccctcgacatc
gctaaggccttcacttccccggtggacctgcgtgactaccctctctactgcacggtggtt
gcctaccccacagacctcggcacgatcaggaagagactggagaatcaattttacaggcgg
atctctgctctgatgtgggaggtgaggtacattgaacacaacagcaggaccttcaacgag
cccgagagccccattgtcgcctcggccaagatcgtcactgatgtgctgctccgattcata
ggggaccaaagctgcatggacatcctggaactttataataaagtgaagacggagctgagc
agtgcagacgaggaggaagaggaggccgatgtggatgtagactctgatactccggggacc
tctactggacaaaagtctacgccgaagtactcaaagaggcagatctcccggctggacgtg
ggtgcctggaaggagcagtgccaagagctgctgaaccgaatgtttgagagggaggactcc
gaaccgttcagacagcctgttgacctctttgcctatccggattaccgggatattatcgac
acaccggtggatctgagcgtggtctcggagacgctggccgcagggaactatgagaacccc
atggagttcagcaaggacgtgaggctgatcttcagcaactccaaggcctacactcccaac
aagaagtccaggatctacagcatgactctcagtctgtctgcctcctttgagaaccagatc
ctgcccatcatctctgactacaagtccgcagtgcaggggcagaggcgcagccggcagagg
atgagttaccgcaagagactgaagagcagcagcagctccccctccaccagccaagcctcc
agtccgaaaggaaagcacaagcaagccaggacccagcctaaatcaaccccaaatacctca
ttgtctctaaccaggaccagttccacaaggtcatctcaagcttcagaaacgacagaggac
ccaagccgctctgtgatgggtgaagatgaaaatgaagatgaagacagccagccttcctca
acgagctctatcactgccagcagaagtggaggagccggggccgagcgggtgacaagaagc
cgcgccacccctagcaagcgagttccctctcccaatggaccattgaccaatgggggaaac
tggcccctttgtgcctccgccaagagaaagctggcagtggactctgacacttcagacatt
gagaagcctgagggaacagaatccagcttgtccacttcttcgttgtcatcgtcatcctcc
tcctcctcttcctcctcctcttcctcaggcagctcgagttctgggagcagcagcagcagc
agcgagggctcagagtcagaccaggaattcatcgacggaggagatcatgactacagcaag
gccatccgcccccgcctcacccgcaaaaccaagaaggcagccaggcctgtctctgcaaac
nttgaagaaaaagaaagagagccagcgcggggcaggcaggcaagtcgaaggaaaaggccc
cggctaatggaggatgaagaggagcaggaagggggtgaggaggaggaggaggaggagcag
gaactggaactggaaaaggtgaggggaacccgcaagtcagctgtcaaagagtccaggatt
aatacccgcaaccagggcaggagaaccgtattgtacaatgacgactcggaggacgacacc
tctgtgccagcggaggaccccctcaacctgggcatgtcccgctctggcagggtgcgcaag
atgactgagaaggctcgggttagccatctcatgggctggaatcactga
DBGET
integrated database retrieval system
