Acipenser ruthenus (sterlet): 117430685
Help
Entry
117430685 CDS
T07327
Name
(RefSeq) cleavage stimulation factor subunit 2-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117430685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117430685
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117430685
U7-dependent histone pre-mRNA processing factors
117430685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
117430685
NCBI-ProteinID:
XP_034759860
LinkDB
All DBs
Position
21
Genome browser
AA seq
538 aa
AA seq
DB search
MASLAAAVAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYD
RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV
IESPYGEPCNSEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAY
ALLQAQVVMRIVDPEIALKMLHRPTNIQPLIPSSQPGPGSVPNLPLNQPNPPASQPQQMV
GMHVNGAPQMMQPAQILGGVAVPGPLGPAGGMQQQIGIPQGGPVPMDRGQGSLQHSPVGP
AGQAQIERPQVPMPDPRAPMRGGPPVAAVPPRGLLGDGPNDPRGGTLLSVTGEVVEPSRG
GFMGAPPHQGPPMHLPHDGRGPPPDNRMAHDMRGGPMGEPRGMMGEPRGPMMDQRGPPME
ARGGRDPRGVEPRGLDPRGPVPAPRVPMPGGMQGPGPHNMGANVPQPARQPAPGLSVGAQ
PGGFSPAQSQVTPQDHEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKSAGAP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctagccgctgctgttgctgctgctgctgcggcggcgaacagggatcccgcc
gtggaccggtccctgcgatctgtgttcgtgggtaatattccatatgaagctacagaggag
cagttgaaggatattttctcagaagttgggctggtggtcagtttcaggttagtgtatgac
agggaaactggcaagcccaaggggtatggcttctgcgagtaccaggatcaggagactgcc
ctgagtgccatgcgcaacctgaacgggagagaattcagcgggcgagccctgcgtgtggac
aacgctgccagtgaaaagaacaaggaggagctcaagagtctgggcactggtgccccggta
attgaatcaccgtacggagagccctgtaactctgaagaagcccccgagtcaatcagccgc
gctgtcgccagcctccccccagagcagatgtttgagctgatgaaacagatgaaactgtgt
gttcagaacagtccccaggaagcccggaacatgcttctccagaacccccagctggcgtac
gccttgctgcaggcacaggtggtcatgaggattgtggaccccgaaatcgcactgaaaatg
cttcatcggcccacgaacatccagcccctgattcccagcagccagcctggtcctggatct
gttccgaacctgcccctcaaccagcccaaccctccagcttctcagcctcagcaaatggtg
ggcatgcatgtgaacggagcccctcagatgatgcagcctgctcaaatcttgggaggggtg
gcggtgccaggccctctgggtccagcaggtggcatgcagcagcaaattggcattcctcaa
ggaggtcctgtaccaatggacagagggcaaggaagccttcagcactcgcctgtaggaccc
gcagggcaggcgcagatcgagcggcctcaagtgcccatgccagacccccgggcccccatg
agagggggtcccccagtggcagccgtgcctccccgaggcttgctgggagacgggccgaac
gacccccgagggggcaccctgctctccgttacaggggaggtggtggagcccagccggggg
gggttcatgggtgcaccacctcaccaggggccgccaatgcacctcccccacgatggacga
ggccccccaccagacaaccgcatggcacacgacatgagaggcggccccatgggagaaccc
aggggcatgatgggagagcccagaggaccaatgatggatcagcgagggccgccaatggag
gccaggggtggccgggatcccagaggggtcgagccccggggtcttgatcctaggggccct
gtccctgcacccagagtccccatgcccggtggaatgcagggtccggggccacacaacatg
ggagccaatgtgcctcagcctgccagacagccagcgcccggtctctctgtgggggcgcag
ccgggaggtttcagccctgcccagagtcaggtgaccccgcaggaccatgagaaggctgcc
ctgatcatgcaggtcctccagctgacccccgagcagatcgccatgctgcccccggagcag
agacagagcatcctcatcctgaaggagcagattcagaaatcagcgggagccccctga
DBGET
integrated database retrieval system
