Acipenser ruthenus (sterlet): 117430689
Help
Entry
117430689 CDS
T07327
Name
(RefSeq) protocadherin-11 X-linked-like isoform X5
KO
K16498
protocadherin delta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117430689
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117430689
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117430689
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117430689
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117430689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6249
EOS1
AP3D1
Motif
Other DBs
NCBI-GeneID:
117430689
NCBI-ProteinID:
XP_033906938
LinkDB
All DBs
Position
21:16593843..17069864
Genome browser
AA seq
1036 aa
AA seq
DB search
MNLVSKAFLNVALLACIIFQSGAQEKDYTVREELPENVLIGNLGKDLDLALDPNIKLSSP
LQFKLVYKTGDVALVRVEENTGEIFTTSNRIDREKVCSGIHSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSALDLDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGSPPKSSTAILQVTIA
DVNDNRPVFKESEIELSIPENAPVGTSVTQLHATDADLGLNAQIHFSFSNQISNAAKRLF
NIDSTSGLITIKEPLDREASPVHKLTVLASDGSSTPSRAIVTVNITDINDNVPSIDTRYI
INPINGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCYTDHDVPFRLKPVFDNQFLLET
AAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNVPTFTQPVIGLSIPENNA
PGTQLTKISATDADSGRNAEINYSLGYDAPSVFNLDRRSGILSVVRRLDREKQDKYTFTV
VAKDNGSPSLQSNATVMVMVQDQNDNSPAFTHNEYNFYVPENLPLYGTVGLITVTDVDSG
DNAVITLSILNGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGRPQRSSLAKVT
INVVDINDNRPVFVIPSSNHSYDLVKSTTSPGSVVTRVFAIDNDTGMNAELHYSIIGGAA
RGLFSIDKITGNITLQEKIVAADQGLHRLVVKVKDLGQPESLYAIALVHLFVNETVANVT
YIQELVYKSMETPLDRNVGDSMVTPQNNGYIIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKSKQSGEWVSPNQENRQTKKKKKKKKRSPKSLLLNFVTIEESKPDDPAHEHING
TLDLPVELEEQTMGKYNWATTPSTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTTGPIHTRQETALKPPLYGT
LYGTGTARSHRIKINL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggtatccaaagcattcctaaatgtggctttgttagcctgcatcatcttccag
tctggagctcaggagaaggactacacagtgcgagaagagctaccagaaaatgtcctgatc
gggaacctgggcaaggacctggacttggccttggacccgaatatcaagctatcttcccca
ctccagttcaagctggtgtacaagactggggatgtggccttggtgcgggtggaggagaac
acaggggagattttcaccacctccaaccgcatcgaccgcgagaaggtctgctcagggatc
cacagcgagaaccgttgcttctatgaggtggaggtggctgtgctgcccgatgaggtcttc
agactggttaagatccgcttcctcatcgaggacatcaatgacaacgccccactcttccag
tccaccgttatcaacatctccattccagaaaacacagccatcaactcacgctaccctgtc
ccctctgctctggatcttgatgtgggtataaatggaatacagcactatgagcttgtgaag
agtgtaagtgaatttggactggacatcattgagaccccagagggagacaaatggccacag
ctgattgtccagcagaaccttgatcgagagcagaaggacacatttgtcatgaagatcaag
gtggaagatggagggtcaccaccaaagtccagcactgccatcctccaagtgaccattgca
gatgtcaatgacaaccgccctgtgttcaaggaaagtgaaattgagttgagcatcccagaa
aatgccccagttggtacttcagtcacacaacttcatgctacggatgctgacctgggcttg
aacgcacagatccacttttcctttagcaaccaaatttccaatgctgccaaaaggctcttc
aatattgacagtacctctggattgatcactattaaagaaccactagacagggaagcgtct
ccagttcataaattgacagtattggctagtgatggaagctctaccccttctagagctata
gtgacagtcaacattacggatatcaatgacaatgtcccctccatagacacaaggtatatc
atcaaccccatcaatgggacagtccttttatcagaaaaagctcctctcaacaccaaaatc
gctctgattacagtgatggacaaggatgctgacttgaatgggaaagtcacttgttacacc
gaccatgatgttccctttcgattgaaacctgtctttgacaatcagttcttgctggagact
gcggctcctctggattatgagacaaccagggagtacgctattaagattgtggcatccgat
tcgggaaagcctccactcaacacttcagctatggtactgataaagatcaaagatgagaat
gacaatgtcccgacttttacccaaccagttataggactgtccattccagaaaataatgcg
cctgggactcagttgacaaaaattagcgcaactgatgcggacagcgggcgtaatgcagag
atcaattattccctgggatatgacgccccttcagttttcaatctagaccgcaggtcagga
atcctgtcagtggtgcgcagattggacagggaaaagcaggacaagtacaccttcacggtt
gtggctaaggataatggctccccttctctgcagagcaacgccactgtgatggttatggtc
caggatcaaaatgacaacagtccggctttcacccacaatgaatacaacttctatgtgccc
gaaaacttacctttgtatggtacagtgggcttgatcacagtaacggatgtggactctgga
gataatgcagttatcaccctttccatattgaatggcaaagacaactttatcatagatcct
aaaactggagttattaagcccaacatcacctttgacagagaacagcaaagctcttacacc
tttgtggtaaaggctgtagatgcaggtcggcctcagcgttcctcgcttgccaaggtcacc
atcaatgttgtggatataaatgacaaccggcctgtgtttgttatcccatcctccaaccac
tcttatgatttagtcaaatcaaccactagcccaggctctgtggtgacaagagtgtttgct
atagacaatgacactggcatgaatgcagaacttcactacagcatcattggtggtgccgct
agggggttgttttccattgataaaattactggcaacattacattgcaagaaaagattgta
gctgcagatcagggcttgcacaggcttgtagtcaaagtcaaggacttggggcagcctgaa
tcgttatatgccattgctctagtgcatttgtttgtcaatgaaactgtggccaatgtcaca
tacattcaagagcttgtgtataaaagcatggaaactcctttggatcggaacgtaggtgac
agcatggtgaccccccagaacaatgggtacatcatagtagtcattgcaatcattgcaggg
accatgacagtgattctggtcatatttgtcacagctctggtgcgctgccgacaaacaccc
aggcacaaagtggtgcaaaagagcaaacagagtggcgagtgggtgtcccctaaccaggag
aaccggcaaacaaagaagaaaaagaagaagaagaagaggtctcccaagagcctcctcttg
aactttgtcaccatagaagaatctaagccagatgacccggcccatgagcacattaatgga
accttggacctcccagtggagttggaagagcagactatgggaaagtacaactgggccacc
acaccctcaaccttcaaaccggacagtccagatttggctaagcattacaagtccgcctcc
cctcagcccaccttccagatcaaacctgagaccccggtcccgcccaagaaacatcatgtc
attcaggagcttccgctggataacacctttgtggtgggttgcgactcactctccaagtgt
tcttcaagcagctcggatccctacagtgtctctgagtgcagctgccagggaggcttcaag
accacagggcccattcacacacgccaggagacggcactgaaaccaccactctatggcaca
ctctatggcacaggtacagcacgctcccacaggataaaaatcaatctctag
DBGET
integrated database retrieval system
