KEGG   Acipenser ruthenus (sterlet): 117430870
Entry
117430870         CDS       T07327                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03420  Nucleotide excision repair
arut04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117430870
  09124 Replication and repair
   03420 Nucleotide excision repair
    117430870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117430870
   03400 DNA repair and recombination proteins [BR:arut03400]
    117430870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117430870
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     117430870
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117430870
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117430870
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117430870
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 117430870
NCBI-ProteinID: XP_033907311
LinkDB
Position
20:complement(3877649..3890699)
AA seq 861 aa
MFPTGLSSPNPPPPAQEVRPAASDGINSSSNISSTSKKRKINSSEREEFEPISSSPSKSI
GNSPSSGSSTSHHVQKKLRFEDSVDFIGLDVKMAEESSSSSSTSSNKSKNLFLAAGVGHH
ANGLTKTSTGSTSFSNSKPGAAKKLVIKNFKEKPKLPENYTDETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIHQFREDALDSVLFLKKIDKC
WQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDQKVQNKTIDGILL
LIERERSGEAIGRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEHEVPD
YLHHVSKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRIQD
MSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDI
CFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQYMQCQNVPGNIELTVNILTMGYWPTYVPMEVHLPAEMVKLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLATG
IEDGELRRTLQSLACGKARVISKTPKSKDVEDGDKFTCNDDFKHKLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENPNQYNYVA
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccgccgccagctcaggaggtcaggcca
gcagcttctgatggtattaacagtagcagcaacattagctcaacgtccaaaaagaggaaa
ataaacagctccgaaagggaagaatttgaaccgatttcctcgtctccttccaaaagcatt
ggcaattccccctcctccggttcttctacctctcaccacgtccagaagaagttgaggttc
gaggactctgtcgattttatcggactggatgtgaaaatggctgaggagtcctcttcttct
tcatcaacgtcttctaacaagagtaaaaacctctttttggctgctggcgttggacatcat
gccaacgggctgacaaaaacatcgacagggtccacaagcttctccaacagcaaacccgga
gctgccaagaaactagttataaaaaacttcaaagagaaaccgaaattgccagagaactac
actgacgagacctggcagaaactgaaggaggcggtggaggccattcaaaacagcacttca
ataaaatacaatctagaggagctttatcaggctgttgagaacctctgttcccacaaaatt
tcagcaaaactttataagcagctgagggcggtgtgcgaggaccacatcaaggctcagatc
catcagttcagagaggatgcattagacagtgtgctgttcctgaagaagatagataaatgc
tggcaggatcactgcagacaaatgatcatgattcgaagtatcttcttgtttttggatcgg
acttatgttcttcaaaattcaatgctgccatctatttgggacatgggactggagttgttt
agattttacataatcagtgatcagaaagtgcagaataagacgatagacggaatcctgctg
ttgattgaaagggagcgaagtggtgaggccatcggcaggagtttgctccgaagtcttctc
agcatgctctcagatttgcagatttaccaggattcatttgaacagcggtttttggaagag
actaatcgtttgtatgctgccgaaggtcagaggctaatgcaggaacacgaggtcccagac
tacctgcaccatgtaagcaagcgcttggaagaggaagctgacagggttatcacgtattta
gaccagagcacacaaaagccccttatcgctactgtggaaaaacagctattaggtgaacat
ctaacagccactcttcagaaaggtctaaaccacctcctagatgagaacagaatccaggac
atgtcccttttgtaccagctcttcagcagggtgcgagggggtgtgcaggtcctccttcag
cactggattgagtatattaaggcctttggaagcacgatagtaatcaaccctgaaaaggat
aagacaatggtccaggagctgctagattttaaggacaaggtggatcacatcatagacatc
tgcttcttgaagaacgagaagtttgtcaacgccatgaaggaagcttttgaaacgttcata
aacaagaggccaaacaaaccagcagaactaattgcaaagtacgtggattcaaagctgcgt
gctggcaacaaagaagcaacggatgaagagctggagaagatgttggacaaaataatgatc
atattcaggttcatttacggaaaagatgtttttgaggcattttacaagaaagatttagca
aagaggttactggttgggaagagtgcttcagtagatgctgagaagtccatgctgtccaaa
ctaaaacacgaatgtggagctgctttcactagtaaattggaggggatgttcaaggacatg
gagctttcgaaagacatcatggttcagtttaaacagtacatgcagtgtcaaaacgtacct
ggtaatattgaactgacagtaaatatcctaacaatgggctactggccaacatacgtgcct
atggaagttcatctacccgcagagatggtaaaactgcaggagattttcaaaacgttttac
ctggggaagcacagtggccggaagctccagtggcagtcaacactaggacactgtgtatta
aaagctgagtttaaggagggtaaaaaggagctgcaagtgtcacttttccagactttggtg
ttgctcatgttcaacgaaggagaagagttcagcttggaagaaatcaaactggcaacagga
atagaggacggtgaactgaggcgaactctgcagtccctagcctgtggcaaggccagagtc
atttccaagaccccgaagagcaaagatgtggaggacggagacaagtttacctgcaatgat
gacttcaaacacaaactcttcaggataaagatcaatcagatccagatgaaagaaacggtg
gaagaacaagccagcactacagagcgagtgtttcaggacaggcagtaccagatcgacgcg
gccatcgtccggataatgaagatgaggaagacactcagccataacctcttggtgtcggag
gtctacaaccagctcaaattccctgtcaagcctgctgacctgaagaagagaatagagtca
ctaattgaccgggactatatggagcgtgacaaagagaaccccaaccagtacaactatgta
gcgtag

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