Acipenser ruthenus (sterlet): 117430896
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Entry
117430896 CDS
T07327
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117430896
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117430896
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
117430896
NCBI-ProteinID:
XP_033907373
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Position
28:18213466..18237962
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AA seq
608 aa
AA seq
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MMCDSSPASLCRRGNGDVTMVGLGVKLEEEEAEVGRAPSRDTQQTSPCDWSLQPPSRGGT
PRNTHTPSDSSPGRGRTHGLSPDPVQIPHERLELNRNMSEVMPTIEKLLSSEWRDKILGN
NKELKGTPDSLAEKELQLLVMINQLSSLRDQLLGAHSEQRNMAAMLFEKQQQQMELSRQQ
QEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHHNTQALTVPSDPQMGLPIQPI
PCKPVDYPMHLLQNPHSTPVKRSNGPVHMQEGPQPLNLTSKPKSQELGKAPSPQSMDLGH
GHLPADYRPPLDLQHSPSRSGLALGFLGEGDAVTKAIHEARQLLRSHGTDGRERDSAGRK
DGSRGEVCLLRERAEECRPQHRAADDSSDSEAGGLSAARSVGFPDSRAPSAGHIKRPMNA
FMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPD
YKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEGRPGGYTGSQSEQLHYPSAEAPPYPCQ
PVSMTTLPMQSTLLERYLPRVLEPHGLRPAGGEERDRGPTPTERHPNSEGEESDTGERSE
GELVVLTD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgattcgagccccgcctctctgtgtcgccgcggcaatggggatgtgaccatg
gtgggcctcggtgtgaagttggaggaagaggaggctgaggtgggcagggccccgagccgt
gacactcagcaaacctcgccatgtgattggtcactgcagccccccagcaggggagggacc
ccgcgcaacacacacacaccctcagacagctcccctggtaggggacggacacacggactc
agccctgacccggtccagataccccacgagagactggagctcaaccggaacatgagtgag
gttatgccaaccattgaaaaactgctgagcagcgaatggagagacaaaatcctaggaaac
aacaaggagctcaaaggtacccccgatagcctggcggagaaggagctccagcttctagtg
atgatcaaccagctctccagcctgcgggaccagctcctgggagcccactcggagcagagg
aacatggctgccatgctcttcgagaagcagcagcagcagatggagctttccaggcagcag
caggagcagattgcaaagcagcaacagcagttaattcagcagcagcacaaaattaacctg
cttcagcaacaaatccagcaggtcaacatgccctatgtgatgatcccagcattccatcac
aacacgcaggcccttactgtcccctctgacccccagatgggactccctattcagcccatt
ccttgcaaaccagttgactatcccatgcatctgcttcaaaacccccactccacccctgta
aagaggtcaaatggaccagtccacatgcaggagggtcctcaacccttgaacctgacctcc
aaacccaaatctcaggagctgggaaaggcccccagtcctcagtcaatggatctgggacac
gggcacctaccagcggactacagacccccccttgatctgcagcacagcccctctagatcc
ggcctcgctctggggttcctgggcgagggggacgctgtcacgaaggcgatccatgaagcg
cgccagctactccggagccatggcacagacgggagagagagagacagcgccggtaggaag
gatggatcgagaggggaggtatgccttctgagagagagggcagaggagtgccggccccag
caccgggctgccgacgacagcagcgactcagaagcaggaggactgtcggcagccagatcc
gtggggttccccgactccagggcgccctccgctggacatatcaagaggccgatgaacgcc
ttcatggtgtgggccaaggacgagaggcggcgcatcctgcaggctttcccagacatgcac
aactccagcatcagcaagatactcggatcgcgctggaagtccatgtcgaaccaggagaag
cagccatattacgaggagcaggcgaggctgagccggcagcacctggagcgttaccccgac
tacaagtacaagccgcggcccaagcgcacctgcattgtggagggacgtcggctgcgcgtc
ggagagtacaaggccatgatgaagagccggagacaggaggggcggccagggggctacaca
gggagccaatcagagcagctgcattacccctcagcggaggccccgccctacccttgtcag
ccggtctccatgacgacgctgcccatgcagtccaccctgctggagcgctacctcccacgt
gtccttgagccacacggcctgcgaccggccgggggggaggagagggatagggggccaacc
cctacggagagacaccccaacagtgagggagaggagagcgatacaggggagcgcagtgag
ggggagctagtggtgcttacagactga
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