Acipenser ruthenus (sterlet): 117431039
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Entry
117431039 CDS
T07327
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117431039 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117431039 (gspt1)
03012 Translation factors [BR:
arut03012
]
117431039 (gspt1)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117431039 (gspt1)
Translation factors [BR:
arut03012
]
Eukaryotic type
Release factors
117431039 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117431039
NCBI-ProteinID:
XP_033907513
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Position
15:complement(4994088..5006021)
Genome browser
AA seq
589 aa
AA seq
DB search
MDPRDTAPDSWEQEDDVEAQTDAQLQAAFNRLNVNAKPFVPNVHAAEFVPTFLVNEVSEN
TDSGDAPAAESPSLEEPVSCGGSDGVTSMEVSDTAAPVENGEAEMTAEESWEQKDEPNEA
EPGGGPSGDGGPADESAQEMMEDEEELPTPKVVVVPPDAPKKEHVNVVFIGHVDAGKSTI
GGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE
KKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA
GVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK
DPADFCTWYSGLPFIPHLDNLPNLNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQ
QLVMMPNKHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSG
RTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQD
QVCIARLKTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgccccggattcgtgggaacaggaggatgatgtggaggcccag
accgacgcgcaacttcaggccgccttcaaccggctcaacgtgaacgccaagccgttcgtc
cccaacgtccacgccgccgagttcgtgccgaccttcttagtgaatgaggtctctgaaaac
acagacagcggtgatgcacctgctgctgagtccccatctctagaagagccagtatcctgt
ggaggttctgatggagtcaccagcatggaagtttcagacactgctgcaccagtggagaat
ggagaggcagaaatgacagcagaagaatcgtgggaacagaaagatgagccaaacgaagca
gagccaggaggcggtccttcgggggatggaggaccagctgacgaaagtgcgcaggaaatg
atggaggacgaagaggaattaccaacacctaaagtggtcgtcgtacctccggacgcccct
aaaaaagagcatgtgaatgtggtgtttatcgggcatgtggatgctggtaaatcaacgatt
ggaggacagattatgtaccttacagggatggtagacaaaaggaccctggagaaatatgaa
agagaagcaaaagaaaagaacagagaaacttggtacctgtcctgggcattggatacaaac
caggaagagagagacaaggggaagacggtggaggtgggacgcgcctactttgaaacggaa
aagaagcattttaccattctggatgctccaggccacaaaagttttgtcccaaacatgatt
ggtggcgcatcacaggctgacctggctgttttggtaatctctgccaggaaaggagagttc
gagacaggttttgaaaagggtggccagacgcgagagcatgctatgttggcaaagacagca
ggagtaaaacatctgatagtccttgtcaacaaaatggatgaccccacagtgaactggagc
ctggagaggtatgaagaatgtaaagagaaactagtgccatttttgaagaaggttggcttt
aaccctaaaaaagacattcatttcatgccctgctctggcctgacaggggccaacctgaag
gatcctgcagatttctgcacctggtattcagggttaccattcattccacatctggacaat
ctgccaaacttaaacagatcaagcgatggacctgtcagactaccaatagtagacaaatac
aaggatatgggcactgtggtcctgggcaagctagagtctgggtccattagtaaagcacaa
cagcttgtcatgatgccaaacaagcacacagtggaagtcctgagtttgctctcggatgat
gtagagacggatgatgccagcccaggggaaaacctgaagctgagactgaaaggaattgaa
gaggaggagatcctgccagggttcattctgtgcaacgcggagaacctctgtcactccgga
cgcacctttgacgcccagattgtcatcattgagcacaaatccatcatctgcccaggttac
aacgcagtgctgcacatccatacatgcattgaagaagttcaaatttcagccttaatctgc
ctggtagacaaaaaaacgggcgagaagagcaagacgcgacctcgatttgtgaaacaagac
caagtgtgtatcgctcgcttaaagactgcaggaaccatctgccttgagaccttcaaagat
ttcccccagatggggcgctttaccttgcgggatgaaggtaagaccatcgccatcggcaag
gtgttgaagctggtagcagagaaagactaa
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