Acipenser ruthenus (sterlet): 117431087
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Entry
117431087 CDS
T07327
Name
(RefSeq) protocadherin-12-like isoform X1
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117431087
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117431087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
117431087
NCBI-ProteinID:
XP_033907604
LinkDB
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Position
15:complement(23827981..23835433)
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AA seq
1208 aa
AA seq
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MAKAAQLPILLLCFLHTVCCLDSVPPTIQYKVLEEVPTGTLIGKIADDLSLEGENEALED
FQIVEPVRALPFRVGLQDGTLSTADRLDRDALCWDTSPCLIPFNILYRKGGTIELLQLQV
EVLDINDHSPTFPNLEQEIEISESASLHTTIPLDRALDPDAGTNALHTYSLSPNQHFELD
VITRSEGTKHGQLVVIKALDREVQSSCEMFLTACDKGNPPKCGTMLVRVNILDSNDNSPV
FERSLFSVELKEDTMPGTTIINLQATDPDQGANGEIEYSFSKHVPLEVLSIFNINPQTGT
VTLTGVLDYEERHTYELDIQARDLGPNPIPAHCKLHIKVLDVNDNAPKIHVMWAPPESDV
AMVSEGAATETFLALVMVSDADSGFNGNIQCQVHHGLGHFRLKRTHGDNYMVVTNATLDR
ERQEKYNLTLVAKDQGIPSFSLTKHLTVHVMDENDNAPVFSKSLYEVSFQENNPHGLYIL
TVKAHDVDLGLSGNVTYSIKDSTKPGKPAASFIIHPTDGMIYAQQSLDFEQTKGLTLIVE
ATDNGQPPLSSSASVLINIQDVNDNHPLIVDPVLKNHRAALSIPVNTEKREIVSEVEDAA
SEHRDTLTNYHLELFPKSNDSAAKLKPDGYLVTTVKARDADAGLNGELRYEIASRDSLFE
IDEVTGQIYVNTSNVTELIGKVFVVEVTVRDLGSPPLSTRASLELTFLSLFDHLKNSTPG
QHGLLSFPLTIALCLGAFCLLVALAATLVTTFCRNEKRENRAYNCRQAESTYTRHPRRPQ
KQIQKADIHLVPVLRGRQEEPAGGEPGRPPSAGSTTTLDALEAFPPCQFNLSPSLSRTLR
NQTFPENNSTLPLSPPRTLRKPHNIEESGTLPRTPASPYRTLKKPKNMEFHQIEGPTAQL
QAPLPYTGTLKLPGKAAVQHSAQEEPHSAPASPPFRTLRRQRITDSKSRPEKDDHQQILR
NLVRISMAALAEYNPIELTAASPEVQQVSQLLSLLHRGQFQPKPNFRGNKYSARAGRSGV
QDADWQSTKDSGHGESEAGDMDWETGRDSPIDPLLVEELDNLLTQTDDVFMDLPDPAWMA
RLSLPLTTDYRENVFVPEGLPSPETPALPPAADGAASFSTFGKAPGESSQISGHLLSEVS
TLFEMLLTQKADSHPRTSAEVLYRLSAAYRRSLGLEGAATGGGNFPRDSPKTQDKADPSR
DMEIHQLV
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagctgctcagctgcccatattgcttctgtgcttcctgcatactgtttgctgt
ttggattctgttcctcctacaattcaatacaaagttttggaggaagtgcccactgggaca
ttgattggaaagattgctgatgatctgagcctggaaggggagaatgaagcactggaggat
tttcaaattgttgagccagttcgggctttgccattccgggttggactacaagatgggact
ctttccactgcagatcgcctggatagagatgccctttgctgggataccagcccttgtttg
attccttttaatatactgtataggaaaggagggaccattgagcttttgcagttacaggtg
gaagtcttggatataaatgatcacagtccgacttttccaaacttggagcaggaaattgag
atttcagagagtgcctcactgcacaccacaataccattggatagggcgctggatccggat
gctggtaccaatgctctgcatacttattccttatcccctaaccagcattttgaattagat
gtcatcacccgatcggaaggaaccaaacatgggcagcttgtggtcatcaaagcactggac
agggaggttcagtcttcctgtgaaatgtttctgacagcctgtgataaaggaaatccacca
aaatgtgggaccatgctggtaagggttaatattttggattccaatgataacagtccagtt
tttgagcgcagcttgttttccgttgagctaaaggaagacacgatgccagggaccaccatc
atcaatcttcaggccaccgatcctgatcaaggggccaatggagaaattgagtattccttt
agcaagcatgtccctttagaagtactgagcatcttcaatattaacccccaaacaggaaca
gtgactctaacaggagttttggactatgaggaaagacatacttatgagcttgacatccaa
gccagggatttggggcccaatcccatccctgcccattgcaaactccatatcaaagtcctg
gatgttaatgataatgcacccaagatacatgtcatgtgggctccaccagagtctgatgtt
gccatggtttctgagggtgctgctactgaaaccttccttgccctagtgatggtatctgat
gctgactctgggttcaatgggaacatccagtgccaagtccatcatgggctgggtcatttc
cggctgaagaggacccacggagacaactatatggtagtgaccaatgccaccttggacagg
gagaggcaggagaagtacaacctcactctggtggccaaggaccaaggcatcccatccttc
tctttgacaaagcacctcaccgtacatgtaatggatgaaaatgacaatgcacctgtcttc
tcaaagagtctttatgaggtttctttccaggagaacaatccccatggcctctacattctt
acggtcaaagctcacgatgttgacctgggcctcagtgggaatgtcacttactcaatcaag
gattccacaaaaccaggaaaaccagctgcctcttttatcatccatcccacagatggtatg
atctacgctcagcagtcgttagattttgaacagacaaaaggtcttacactaatagtggag
gcaacagacaatgggcaaccaccactgtctagcagcgcttctgtcttaataaatatccaa
gatgtcaatgataaccatcctttgattgtggacccagtgctgaagaaccacagggcagca
cttagcatccctgttaacacagagaagagagagatagtcagtgaggtggaagatgctgct
agtgaacacagagacacgctaactaattaccacctcgagctttttccaaagagtaacgac
tctgcagcaaaactgaaaccagatggatacctagtaacgactgtcaaagccagggatgct
gatgcaggcctaaatggagagctccgctatgagatagcaagtagggatagtttgtttgaa
atagatgaagtgactggacagatttatgtgaataccagcaatgttacagagctgattgga
aaagtgtttgtagtagaggtcactgttcgggacttgggttctccaccactctccactcga
gcttctttggaattgacttttctcagtctctttgaccatctcaaaaactctactcctggc
cagcatggactactgagctttcccctgactatagccctctgccttggggccttctgtctt
ctggttgccttggcagcaaccttggtgaccactttctgtcggaatgagaaacgtgaaaac
cgggcttacaactgcaggcaggctgagtccacttacaccaggcaccctaggcgtccacag
aaacagatccaaaaggcagacatacacttagttcctgtgttgagagggaggcaggaagag
ccagctgggggagagcctggcagacccccttcagctgggtcaacaacgactttggatgcg
ctggaagcctttcctccttgtcagttcaacctgtctccatccctcagcaggactctcagg
aaccaaactttcccagaaaacaacagcactctccccctatcccctccgagaactctccgc
aaaccacacaacattgaggagagtgggactcttcctcgtacccctgcttccccctatagg
actctcaaaaagcccaagaatatggagttccaccaaatagagggccccacagctcagcta
caggcacctctgccctatacagggacactgaagctgccaggaaaggctgccgtccagcac
agtgcacaggaagaaccacactcagcccctgcctctcccccatttcggacactcaggagg
cagaggatcacagactccaagtcgaggccagagaaagatgaccaccagcagatcttgagg
aatctggtccggatctccatggcagccttagcagagtacaaccccattgaactcactgca
gcgtccccagaggtacagcaagtctcccagttgctctccttactacaccggggccagttc
cagccaaaacccaacttccgggggaataagtactcagccagagccggcaggtctggtgta
caggatgctgactggcagagtaccaaggatagtggtcatggtgagagtgaggctggagat
atggactgggaaactggacgggactctcccattgaccccctgctggtggaagagctagat
aacctgctgactcagacagatgatgtgtttatggacctccctgatccagcctggatggct
cgcttgtctttgccgcttaccacagactatagggaaaacgtctttgtccctgaaggactc
ccttccccagagacccctgctcttcccccagctgctgatggagctgcctccttctccacc
ttcgggaaggcccctggcgagagttcacagatctctgggcacctcctttccgaggtcagc
accctctttgagatgctgctcactcagaaggcggactctcaccccaggacttctgctgaa
gtgctgtacagactctccgctgcctaccgccgctccctgggtttggaaggggcagcaaca
gggggtggcaactttcctagagactcccccaaaacacaagataaagctgacccttcaaga
gatatggagatccatcaattagtctga
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