Acipenser ruthenus (sterlet): 117431138
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Entry
117431138 CDS
T07327
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03440
Homologous recombination
arut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117431138 (top3a)
03460 Fanconi anemia pathway
117431138 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117431138 (top3a)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117431138 (top3a)
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117431138 (top3a)
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Topoisomerases
117431138 (top3a)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117431138 (top3a)
FA (Fanconi anemia) pathway
117431138 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
DUF6261
Motif
Other DBs
NCBI-GeneID:
117431138
NCBI-ProteinID:
XP_033907673
LinkDB
All DBs
Position
15:2124408..2133528
Genome browser
AA seq
1011 aa
AA seq
DB search
MIFQRGCLTLHAGLRLTTVQEKFSWFCRRVSTEDMRRAQIKKVLCVAEKNDAAKGIAEIM
SNGGMRRKEGLSRFNKIYEYEYHWFGQNVTVSMTSVSGHLLGLEFKAPFQKWHSCNPVVL
FDAEVEKYCPDNYVDIKRTLEREVRQCQALVIWTDCDREGENIGFEVIEVCKAVKQNLQV
FRARFSEITPNSIRNACQNLAEPDQNVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPTV
LSDQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVTHEMEDCEVDFGWKRNRLFHH
TACLVLYQMCMENPVATVIDVSSKPKSKWRPLPLDTVELEKLASRKLKISAKETMKIAEK
LYTQGFISYPRTETNIFPKDLNLTPLVEQQTQDAHWGSFAQGILERGGPTPRNGTKTDQA
HPPIHPTKYTSGLQGNEQRLYEFIVRHFLACCSQDAQGQETTVDIDIAQERFATHGLMII
ARNYLDVYPYDKWYAKVIPVYERGSQFQPTTIEMLDGETSPPQLLTEADLISLMEKHGIG
TDATHADHIETIKSRMYVGLTPDQRFLPGELGMGLVEGYDSMGYEMSKPDLRAELEADLK
LICEGRKDKFTVLRQQIQNYKQVFIEAVRKAKKLDQALSSYFGEAREFTQQEEIQMEIPL
PIRKCPQCSRDMALKRKKDGKGFFLSCMGYPGCKAAVWFPESVLEVSRDESVCPTCRPHP
VQRLKFKFKRGSLPPAMPLEFVSCIGGCDEMLREILDLKYLRGGGGGGGTPQTNPPSGSY
LRNNQSHNQQGRPDNSCGRQPPRSKLEPKRPAAVVSAPRPVQAAQGPAGENAVVCNCGQD
AIILTVRKEGPNQGRQFYKCNTGNCSFFLWADQQPEEGHGSAGGRGFSNPPRSAARPSSG
FGGSAGPSSSVTGRPGGNSRFSGGGGGDAAVCSCNEPAVTRTVMKDGPNRGRSFHTCPKP
REQQCGFFQWADENVPPGPGGGFDSAPQVGGQKGKRQGGKPQLKDPHPRGR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcaaagagggtgcttaacattacacgctggattaaggctgacaacagtccag
gaaaagtttagctggttctgtcgacgagtttcgactgaagacatgcgacgagcccagata
aagaaagtcctgtgtgtggccgaaaaaaacgatgcggccaaagggatcgcagagatcatg
tctaacggggggatgcgaaggaaagaaggattgtctagatttaataaaatctacgaatat
gagtatcactggtttgggcagaatgtcactgtatcgatgacctcagtatcgggtcacctc
ctggggctggagttcaaagctccgtttcagaagtggcatagttgcaacccagtcgtcctg
tttgatgcagaagtggaaaaatactgcccagacaactatgtggatatcaagaggaccctg
gagagagaggtgaggcagtgtcaggctctggtcatctggacagattgtgatcgcgaagga
gagaacattggctttgaggtcatcgaagtctgtaaagcagtgaagcagaatttgcaggtg
ttccgagcccgcttctcagagatcacccccaactcgatcaggaatgcctgccagaaccta
gcggaaccggaccagaacgtcagcgatgccgtggatgtcaggcaggagttggaccttcgg
atcggggcctcgttcaccaggtttcagactctgaggctgcagaagatcttccctactgtg
ctctcggaccagctcatcagctatggcagctgtcagtttcctacgctgggctttgtggtg
gagaggtttaaagccattcaggcctttatccccgagacgttttacaaaattaaagtgacc
cacgagatggaggactgcgaggtggatttcggttggaaaagaaaccggctcttccaccac
actgcctgcctagtcctgtaccagatgtgtatggagaatcctgttgccacggtcatcgat
gtgtccagtaaaccaaagagtaaatggaggcctttacccctcgacacggtggaacttgaa
aagttggcttctcgtaagctgaaaataagtgccaaggagaccatgaaaatagcagaaaag
ctgtacacacaagggtttatcagctatccccgtaccgagacgaacatcttccccaaagac
ctcaacctcacccccctggtggagcagcagacccaggacgcccactgggggtccttcgca
caggggatcctggagaggggcgggccgaccccgcgcaatgggaccaaaacagatcaggcc
cacccccccattcaccccaccaaatacaccagcggcctgcaggggaacgagcagcgcctg
tacgagttcatcgtccgacacttcctggcttgctgctcccaggatgcacaggggcaggaa
accacggtggacattgacatcgcccaggagaggtttgcaacgcacgggctaatgatcatc
gccaggaactacctggatgtgtacccttatgacaagtggtatgcgaaggtgatcccagtg
tacgagcgagggtcccagttccagcccaccaccatcgagatgctggacggagagacaagc
ccaccacagctccttaccgaggccgacctcatctcactcatggagaagcacggcattggc
actgatgccacgcacgccgaccacattgagaccatcaagtccaggatgtacgtggggctg
actccggaccagaggttcctgcctggcgagctggggatgggactggtggagggctatgat
tcaatgggctatgaaatgtccaaaccggacctgagagctgagcttgaagctgacctgaag
ctgatctgtgaagggaggaaggacaagttcactgtcctgaggcagcagatccagaactac
aagcaggtctttatagaagctgtgaggaaggcgaagaagttggaccaggcgctgtccagc
tacttcggagaggcgagagaattcacccaacaggaggaaatccagatggagattcctctt
cccatcaggaagtgtccgcagtgcagccgggacatggccctcaagaggaagaaagatggg
aaagggttctttctgtcctgtatgggctaccctggctgtaaggctgcagtgtggtttccg
gagtctgttctggaggtcagcagagatgaaagtgtttgtcctacatgccgaccacatcct
gtgcaaaggttgaaattcaagttcaagagaggcagcctgccccccgcgatgcctctggag
tttgtgagttgcatcggaggctgtgacgagatgctgagggagatcctggacctgaagtat
ttacgaggaggaggaggaggaggtggtactcctcaaacgaaccctccgtctggcagctat
ctgcggaacaaccagtctcacaatcagcagggacgccccgataactcctgcggaagacaa
cctcctcgatccaaactggagcccaaaagaccagcggccgttgttagcgcccctcgtcca
gtccaggcagctcagggacctgccggagaaaacgccgttgtctgcaactgtggacaggat
gcgatcatcctgaccgtgcgcaaagaagggcccaaccagggccgccagttctacaagtgc
aacacaggcaattgcagcttcttcttgtgggccgaccagcagccggaggagggtcatggg
agtgctgggggcagggggttctccaatccaccccggtcagctgctcgaccctcatcaggg
ttcggaggcagcgctggccccagctccagtgtcactgggcgtccaggtggcaacagcagg
ttttcgggtgggggcggaggtgatgcagccgtgtgcagttgtaatgaaccagcggtgacg
cggacagtaatgaaggacgggcccaacagggggcgctcattccacacgtgtcccaaaccc
agggagcagcagtgcggcttcttccagtgggcggatgagaacgtgcctccaggtccaggt
ggtggatttgattctgctccccaggttgggggacagaaagggaaaagacaaggtggcaaa
ccccaactaaaggacccgcatccaagaggcagatga
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