Acipenser ruthenus (sterlet): 117431293
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Entry
117431293 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117431293
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117431293
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
U-box type E3
117431293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
117431293
NCBI-ProteinID:
XP_033907979
LinkDB
All DBs
Position
15:7444946..7460735
Genome browser
AA seq
1776 aa
AA seq
DB search
MCCVHFFQFECIECRIFSPNLCIKKLPVEQTANLAEANASEDDKIRAMMSQSNHEYDPIH
YMKKLLGPPPPNYTCFRCMKTGHYIRNCPTNGDKNFESTPRIKKSTGIPRSFMMEVDDPN
MKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLPQEQSSSSDEEDPIPDELLCLICKDIM
NDAVVIPCCGNSYCDDCIRTFLLESDEHMCPTCNQTDVSPDCLIANKFLRQAVNNFKNET
GYTKRLRKGQAPQTAPMQGQSRPQVQRPVQLAARPTSSRQQDPLMANIPPPVAAPFPVVP
AAIPTPVLHQTQTPAPVPPAAPTVQVNLVSSGPTLEVSTSVPSPQPQVKHEEPVSVKEPE
KIVITPATSVMVSAATSITTSSVPKVPVLGQPHSVGHSIPTTGQPMRTSTVRLGASRQGW
DASSSRGRPQSDRPPRTQTTTLPSMAPVYVPPPSLFPPPSHNLPLPPGVPLPQFPPLFQP
PTTGYSVPPPLFPPASTTVAAPWVPTVTTVAQGSAIPTIPQAPPLSREEFYRQQRRLKED
SNCRFVAREKSKLDEFTNDFAKELLEYRKIQKERRRSYSRSKSPYSGSSFSGSSYSYSKS
RSRSSRSRSYSRSGSRSHSRSYSRSPVYTRRGGGGRSRSYRSRSRSHGYRRSRTRSPAYR
GGGGGGGGGGGGGGGGYRSRSRSPGYRGHTPSKRPAPPPQPEGDREHFNRYREPPPYDVK
AYCGRSVDQRDPFERERYREWERKYREWYNEYYTPTGNQPRPRPPPSNREHFNPERFGPP
VVRRDNSPYNRGRREDYPPSGQSQSQSQRVRNVPGNYPEKSAYKEGHKSSKEPRKSKEKE
ADNPPADGKGIKHKRHRKKRKGDENELLPSVNSLDGSRKPTGGDEGKGDSVLMPPSRDDA
TPVRDEPMESPSVLYKAVAEKDKREKVKAKGEKLKRKPESSALKKDSSVKTHKPSREKQV
DADNEKSSRVEPPMKKPKEDYSQKAEASKQHVSQKEDKAPLSRKGQQKPAKHHQESKVVK
EEKTKEKKEYAKEASKHEKLPSKEEKPKKYVEKVAKIEEKSRKTSDVKQEKRKRKEEKHV
EKDLEMPLKSPRIETVEVAKQVVKQSQKPEPEKYPEKTIAMPVVEKVDKEENIVPVRKIK
INRETGKKIVSGESIALVEETDGAENIRPEKMKTKIRRKVQAADGTASTLVDYTSTSSTG
GSPVRRLEEKLDIKKTVVKTMEEYNNDSSTPAEDEIVMIQVPLSKWEKEDYESEDDDAKS
ALVAGSGKSATVKNVAVTSSSEIKQTDKDSPQIEKMPKAAKEPASEELQPESKVSKTAVP
SEKEKISEKEKISEKEKISEKEKISEKEKISEKEEIREKEKISEKEIREKEKISEKEIRE
KEKISEKEKISEKEIKEKEHPAVNKETMEKRKAPPSQSDKERNPERSSDKGSEKSGSSYS
SKDRTVEKSNAGSRASSVKDNATAIDKKTDYAGSNRDNPSSKRKEEKLKESNKRRDSPSL
TKEHAPSQKSRDRGVHVDIPRKVATESKRSDHSPARDKKTRIDYKNAPDLKRAVVDDHRS
DKMSSKDTNRHATSEMRSKKEKERDHGGNKSHRTESPDVRTDTERTVGRNEREHNKNKPL
LVRSTRLSSDLARETDEAAFVPDYSESDGDSEASDHNNKLEQVKEKGVVAAPLPPSLSPT
PSQTASVNRSHNQSPSESQPHSRSSSASSAGSQDSKKKKKKKDKKHKKHKKHKKHKKHVG
NESDSENKGQKHKHKKKKSKKSKDKEKDDQKPKVSV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtgtgcacttctttcagttcgaatgtattgagtgtagaattttttctcctaat
ttgtgtatcaaaaaattgcctgttgaacagaccgccaatttggcagaagctaatgcatcc
gaagacgataaaattagagcaatgatgtcacagtccaaccatgagtatgatccaattcat
tacatgaagaaacttttggggccgccacctcccaattacacttgctttcgctgtatgaaa
actggacactatattagaaactgtccaaccaatggggacaaaaattttgaatcaactcca
aggataaaaaagagcactgggattcctcgaagcttcatgatggaggttgacgacccaaac
atgaaaggagccatgcttaccaacactgggaaatatgctattccaactattgatgctgag
gcatatgcgatcgggaaaaaggagaagccccctttcctaccacaggagcagtcttcatct
tctgacgaggaggaccctatccctgatgaactactgtgcctgatttgcaaggatatcatg
aatgatgcagtcgtaattccatgctgtggaaacagttactgtgatgattgtattagaaca
tttcttctggagtcagatgaacatatgtgtcctacttgcaatcagacagatgtttcacct
gattgcttgattgccaataaatttttacgacaggctgtaaacaattttaaaaatgaaact
ggttacaccaaaaggcttcgtaagggacaggctccgcaaactgcaccaatgcaaggccag
tccaggccacaagtgcagcgtcctgtccagctagctgcaagaccgacatcctccaggcag
caggatcctctcatggccaatatccctccacctgttgctgctcctttccctgtcgttcct
gctgctatacccactccagtgctgcaccagacacagacccctgcccctgttccacccgct
gcaccaactgtccaggtgaatctggtctccagtggccctactttagaagtgtccacatcg
gtgccctctccacagccacaagtgaagcatgaagaacctgtttcagtaaaagagcctgag
aaaattgttataactcctgccacatctgtgatggtttctgcagctacatctataactaca
tcctctgttccaaaggttcctgtacttggtcaacctcattcagttggccactctatacct
acaacaggtcagccaatgagaacaagcactgtccgtcttggtgccagtcgacaaggctgg
gatgcgtcatccagcagaggtcgaccacagagtgaccggcctcctagaacacaaacgact
actttgccatctatggcccctgtttatgtgcctcccccgtctctcttccctcctccctcc
cacaacttgcctcttccacctggagtgccacttcctcagttccctcctctgtttcagcca
cctaccactgggtacagtgtaccccctccattgttccctccagcctcaacaactgttgca
gctccatgggttcccactgtaaccactgtagcacaaggcagtgccattcctaccatccca
caggcacccccgctatctagggaagagttctacaggcaacagcgtagactaaaagaggat
tccaactgtcgcttcgttgctagggagaagtctaagcttgatgagtttactaacgacttt
gctaaagaattattggaatacagaaagatccaaaaggaaaggaggcgatcctattcaagg
tcaaagtcgccatacagcggatcatcgttcagtggcagttcctactcttactcaaaatcc
aggtcacgatcctcccggtctcgatcctactcaaggtctggcagccgatctcattctcga
tcctactccagatctccagtgtacaccagaagaggtgggggaggcaggagccggagttat
cgctccaggtcgcgatcacacggatatcgccgatcccgaactaggtcccctgcttatcga
ggaggaggaggaggaggaggaggaggaggaggaggaggagggggggggtatcgctctcgt
tcaagatctccagggtaccgggggcatacccccagtaaacgacctgcaccaccgccacag
cctgaaggtgacagagagcacttcaacagatatagagagccgcccccctatgacgtcaag
gcttactgtggtcgttctgtggaccagagagacccttttgagagggaaagatacagggag
tgggaaaggaagtaccgagaatggtataacgaatactacacccctactggcaatcagcca
aggcctaggcctcctccatctaatagagaacatttcaatcctgaacggtttggcccacca
gtggtcagacgggacaattcaccatacaatcgaggtcgcagagaggactaccctccatct
gggcagagtcaaagtcagagccagagagttcgtaatgtgcctggaaactatcctgagaag
tctgcctataaagaaggacacaaaagcagcaaagagcctagaaaatcaaaggaaaaagaa
gcggataatcctccagccgatggaaaaggtatcaaacacaaaaggcacaggaaaaagagg
aaaggcgatgagaatgaactgttacccagtgtaaattctttagatggttcgagaaagccc
actggtggtgacgaaggtaagggggattctgtactgatgcctccaagccgagacgatgcc
acccctgtcagagatgaacccatggaaagtccatctgtcctctataaagctgtggctgag
aaagacaaaagggagaaggtgaaagcaaagggtgaaaaactaaagcgcaaaccagaaagc
agcgccctcaagaaagactcctcggtgaagacccacaagccgtccagagaaaagcaggtt
gatgcagacaatgagaagtcttcacgtgtggagcccccaatgaaaaagccaaaagaagat
tattctcagaaggcagaagcttcaaagcagcatgtgtcccagaaagaggacaaggctcct
ctgtcccgcaaaggacagcagaaaccagctaaacaccatcaagagtctaaagtggttaag
gaggagaagacgaaggagaagaaagagtatgccaaggaggcatctaaacatgaaaagctc
ccaagcaaggaggagaaaccaaagaaatatgtggaaaaggtggctaaaattgaggagaaa
tctagaaaaacctcagatgttaaacaagagaagaggaaaagaaaagaagaaaaacacgtg
gaaaaagatcttgaaatgcctctcaagtcccctagaattgaaactgtagaagtggcaaag
caagtggtaaagcaatcgcaaaaaccagagcctgagaaatatccagaaaagacaattgcc
atgcctgtagtggaaaaggtagataaagaggagaacattgttccagtgagaaagatcaaa
atcaaccgtgagactggcaaaaagattgtaagcggggaaagcatagctctagtggaagaa
acagatggagcagaaaacattaggccagaaaaaatgaaaacaaaaatacgaagaaaagta
caagctgcagatggaacagcttctaccttggtagattacaccagcactagctccacggga
ggcagcccggttagaagactagaagaaaagctggacattaaaaagacagtggtgaagacc
atggaagaatacaacaatgacagctcaactccagcagaagacgaaattgttatgatccaa
gttcctctttcaaaatgggagaaggaagactatgaatcggaagatgatgatgctaagtca
gcattggttgctggaagtggaaaatctgctactgtgaaaaatgttgctgtaacatcttcc
agcgagataaaacagactgacaaggactctccacagattgagaaaatgcccaaagcggcc
aaagagcctgccagtgaggaactgcagccggaatccaaagtttcaaagacagctgtgcca
agcgagaaggagaagatcagtgagaaggagaagatcagtgagaaggagaagatcagtgag
aaggagaagatcagtgagaaggagaagatcagcgagaaggaggagatcagagaaaaggag
aagatcagcgagaaggagatcagagaaaaggagaagatcagcgagaaggagatcagagaa
aaggagaagatcagcgagaaggagaagatcagcgaaaaggagatcaaagaaaaggagcat
ccagctgtaaacaaggaaaccatggaaaagaggaaagcacctccttcacagtcagacaaa
gaaagaaacccagagaggtccagtgataaagggagtgaaaaaagtggctcctcgtactct
tctaaagacaggactgtagaaaaatctaatgctggttcccgggcctcttcagttaaagac
aatgcaacagccattgacaaaaagacagattatgctggaagtaaccgagataaccccagc
tccaagcgtaaagaagaaaaactaaaagaatccaacaagaggagggactccccttcccta
actaaagaacatgctccaagtcaaaagagcagagataggggtgtgcatgttgacattcca
aggaaagttgcaacagaatcaaagagatctgatcatagccctgcaagggacaaaaagaca
cgtatagattacaaaaatgccccagatttaaagcgtgcagtagtggatgaccatcgatca
gacaaaatgtctagtaaagatacaaacagacacgcaacctcagagatgagaagcaaaaag
gaaaaggaaagggatcatggtggtaacaagtcacataggactgagtcccccgatgttagg
actgacacggagagaactgttggccgaaatgagcgtgagcacaataagaacaagccactg
ctcgtccgatctacccggctgtcctccgacttggccagagaaacagacgaagctgctttt
gtgcctgactacagcgagagcgacggtgacagcgaagcctctgaccataacaataagctt
gaacaagttaaagagaagggggtggtggcagctccccttccccccagtttgagtccaacc
ccaagccagactgcaagtgtgaaccgcagtcacaaccagagcccctcagagagccaacct
cacagccgcagcagcagtgccagctctgccggcagccaagacagcaagaaaaagaagaag
aaaaaggacaagaagcacaaaaagcacaagaaacacaaaaaacacaagaagcacgtcggc
aacgaatctgattccgaaaacaaaggccaaaaacacaagcataagaaaaagaagtccaag
aagagcaaggacaaggaaaaggatgaccaaaaaccaaaagtttctgtatga
DBGET
integrated database retrieval system
