Acipenser ruthenus (sterlet): 117431355
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Entry
117431355 CDS
T07327
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03420
Nucleotide excision repair
arut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117431355 (ercc4)
03460 Fanconi anemia pathway
117431355 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117431355 (ercc4)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117431355 (ercc4)
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117431355 (ercc4)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117431355 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
DUF6847
SelO
Motif
Other DBs
NCBI-GeneID:
117431355
NCBI-ProteinID:
XP_033908093
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All DBs
Position
15:5293779..5299988
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AA seq
897 aa
AA seq
DB search
MAGPLLEFETEMFLNLFSSDGLLLTAEGLGIDRILLQFLRVYSEEGSLVLLLNTTTAEQE
YFIEQLRTEGVSHLPRIITNEVSSSERYSVYTQGGVLFVTSRILVVDFLTDRMPANLITG
ILVYKAHKIIESCQEAFILRLYRQKNKTGFIKAFTDNAVAFSSGFCQVERVMRNLFVKKL
FLWPRFHVAVNSFLERHKPDVVELHVSLTPAMTAIQSSVLDIMNACLKELKRYNPALEVE
ELSLENALGRCFEKMIRHYLDPLWHQLGMKTKSLVQDLKILRTLLQYLTQYDCVTFLNLL
ESLRTSEKAFGQNSGWLFLDSSTSMFVNSRTRVYHIPDSKTCTKTKAGEKRIQGEKEPAE
GKRELVLEVNPKWEALSDVLKEIERENKNTEDGPGRVLICASDDRTCAQLREYVTRGAEA
LLTRLYSRTFGKNEAPPELSKDRRAVSKGRGKGKSDKGPQAKKSRKQTGGKQGGELTLTQ
MLGKLEEKETEEREESKEEIESSMEEIEELLLNLPSDSYYGILKEPLTVIHPLLGCSDPY
SLTRVLHEVEPRYVVLYDAELSFVRQLEVYKASRPGKPLRVYFLIYGGSVEEQRYLTALR
REKEAFEHLIREKASMVVPEEREGREDTNLDLIRDPTPANASTDTRKAGGQQAKTEPARV
IVDMREFRSELPALLHRRGLDIEPVTLEVGDYILSPDVCVERKSVSDLIGSLNSGRLYTQ
CLSMSRFYRRPVLLIEFDPAKPFSLTARSDFRQEISANDITSKLTLLTLHFPRLRLLWCP
SPHATAELFELLKRKQPQPDASAAMAITADSDTVPESSDLYSPGPQDLLLRMPGVNAKNC
RALMNGAGSLAELVNMSQEQLAELLGNATNARLLYEFIHTSSTQAAPKGKKEWKGKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctttactggagttcgagaccgaaatgtttctgaatctgttcagttcggac
gggttgctgctgactgctgagggactcgggattgaccggatccttctgcagttccttcgg
gtgtattcagaggaaggcagcctggttctgctgctgaataccaccactgccgagcaggag
tactttattgagcagctgcgcacagagggggtcagtcatctccctcggattatcaccaac
gaggtctcgagcagcgagcgctatagtgtgtacacacagggaggggttctctttgtcacc
agcagaattcttgtggtggactttctcacagacaggatgcctgccaacctcatcacaggt
atcctggtgtacaaggcacacaagatcattgagtcgtgtcaggaagccttcatccttcgt
ctttatcggcagaagaacaagaccggcttcatcaaggccttcacagacaacgcagtggcc
ttcagctctggcttctgtcaggtggagcgtgtcatgaggaatctctttgtgaagaaactc
tttctgtggccaaggttccacgttgcggtgaactcattcctggagaggcacaaacccgat
gtggtggagctgcacgtctctctgaccccggccatgactgccatccagagctctgtcctt
gacatcatgaacgcctgcctgaaggagctgaaacgctacaaccctgccctggaagtggaa
gaactgtccctggagaatgcactgggaagatgtttcgagaagatgatccgtcactacctg
gaccctctgtggcaccagctgggcatgaagaccaagtctctggttcaagacctgaagatc
cttcgcactctgctgcagtacctcactcagtacgactgtgtcaccttcctcaacctgctg
gagtccctcagaaccagcgagaaggccttcgggcaaaactcaggttggctcttccttgac
tccagcacctccatgtttgttaactctcgcactcgagtttaccacattccagactccaaa
acgtgcacaaaaactaaagcaggagagaagaggatccagggggagaaagaaccggcagag
gggaagagagagctggtgctggaggtcaacccgaagtgggaggctctgtctgatgtgctg
aaggagatcgagagagagaacaagaacacagaggacggaccaggtagagttcttatctgt
gccagcgatgaccggacttgtgcccagctgcgggagtacgtgacccgtggggcagaggct
ctgctgaccagactgtacagccggacctttgggaaaaacgaagcgccacccgagctgagc
aaggacaggagagctgtcagcaaagggagggggaagggcaagtcagacaagggaccgcag
gcgaagaaatccagaaaacagactggaggaaaacagggaggagagctcaccctgacccag
atgcttgggaaactggaagaaaaggagacagaggagagagaggagtccaaagaggaaatt
gaaagcagcatggaggagatagaggaattgctgctcaacctgccctctgattcctactat
ggcatcttgaaggaaccgctaactgtcatccacccgcttttgggctgcagcgacccctac
agcctcacacgggtactgcatgaggtggagccacgctacgtggttctgtacgacgcagag
ctgtccttcgttcgtcagctggaggtctacaaggccagccgtcctgggaaaccactcagg
gtttactttctgatctatgggggttcagttgaggagcagagatacctgacagccttgcga
agagagaaggaagcctttgagcatctcatcagggagaaagctagtatggtggtcccagag
gaaagggaagggcgtgaggatacgaatctggacctgattcgagaccccaccccagcaaac
gcatctacagacacacgcaaagcaggtggtcagcaggcaaagacggagcctgctcgggtc
atcgtggacatgcgagagttccgaagcgagctgccggccttgctgcaccgccgcggcctg
gacatcgagccggtcaccctggaggtgggagattacatcctgtctccagatgtctgcgtg
gagcgcaagagtgtcagcgacctgatcggttccctcaacagcggccggctctacacccag
tgcctgtccatgtcccgcttctaccggcggcccgtgctgcttattgaattcgacccagcc
aagcccttctccctgacagcacgatcagacttccgccaggagatctccgccaacgacatc
acctccaagctcaccctgctcaccctgcacttcccccggctgcggcttctctggtgcccc
tccccccacgccaccgctgagctatttgagttgctgaagcgaaagcagccgcagcccgac
gcctctgctgccatggccatcactgccgactcggatacagtgcccgagtcgtccgacctc
tacagccccggcccccaggacctgctgctcaggatgcccggcgtcaacgcaaagaactgc
cgggcactcatgaacggagcgggcagcctggccgagctggtgaacatgagccaggagcaa
ctggcagagctcctgggcaacgccaccaatgccaggctgctgtacgagttcatccacacc
tccagcactcaggcagcgcccaagggcaaaaaggaatggaaagggaagaggtaa
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