Acipenser ruthenus (sterlet): 117431405
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Entry
117431405 CDS
T07327
Name
(RefSeq) rab11 family-interacting protein 3-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117431405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117431405
Membrane trafficking [BR:
arut04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117431405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
ZapB
EF-hand_9
LANC_like
Motif
Other DBs
NCBI-GeneID:
117431405
NCBI-ProteinID:
XP_033908169
LinkDB
All DBs
Position
15:complement(10727455..10774410)
Genome browser
AA seq
1090 aa
AA seq
DB search
MEQVLLSSPGGHSDWELEQNMGDILKDSPESGLDFIQGEKELVSLKFGDILQENALNLDG
FFRHSRYPNVDQILSWDKGPDCPVLQWEKHSKQDPDINHTAQVELLGFHDNNSVFSSDTP
SLQSEISALDLEKGLSLNTALQSQVDISQHCGINLLDINTELAFISQDEGFTFSSRGETS
LSETTDKGSFQEPVMDLLGLSYKIQGTPLSSPCSPSHTLTSVLVSFHDSPTYTWATEPTS
HEQAQTSSCHHIFPNLLDPALHHTGVEQEGPEPDLGQHGSLLPSQEEWKQGGSSRNSGLQ
PQALERVSDETTAGAELSSDQKFSYCDPMHDKQDCDENVSQGLAHGEPGLDHNLLSQEKV
QGNVVFNQNLTYDQLHDAQGLCLDAVHGKTVLDKRLSQNILHKTTVLDQNSVLDVMHEKE
VLDPDLFHDVVSCDQPVLDQDLSEQESSPSLLRTNARTRECVSPPSGQLLAEGAESAGGG
PDLGEEAVELSPLRAVFDALDQDQDGFVRMEEFVQFATVYGAEQVKDLTRFLDPGGLGVI
SFEDFYRGITAISNGGSDSPLYEMGFSPGAETVGCPEEYDDYAAYEQNEVTDSAYLGSES
TYSECETFTDEDTGTLVHQEMHEEVETDSAIDAALSYTEEGANGPHQHHLSLGSELNNHS
LVTVISGEEEHFEDVGEGRDSKLLADTSTTGQDADTSLTSQLESSMLLSPSAGSFPASLQ
SFLREEVLDFFCSQCHKQINRLEDLSARLNYLEMNSSSKSLSSRKMARHLHQTSTLTLDS
IEDLSRDIMEFAETDMTDKVMFLEKRVSELEKDSAANGEQHTRLRHENLQLVHRANALEE
QLKEQESRSEEALLTEIRRQKEVLCKVERERSIEIENLQARLQQLDEENSELQSCLPCLR
ANIERLEEERRKLQDQVEDVTLRLNEELESRCKMADKLAHERHKNQKEKESTQELIEDLR
KQLELLQLYKLEAEARRGRSASAGLQEYNSRTREAELEQEVRRLKQDNCSLKEQNDELNG
QIINLSIQGAKNLFSASFSESLAAEINSVSRDELMEAIHKQEDINLRLQEYIDRIIVAIM
ESNPSILEVK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtcctgttgtcaagtccaggtgggcattcagactgggaattggagcagaac
atgggggatattctcaaggatagtccagagtctgggctggactttatccaaggagagaaa
gagctggtgtccctcaagtttggggacattctccaggagaatgccttgaacttggacggc
ttttttcggcactccaggtaccctaatgtggaccagatcttgtcctgggataaagggccg
gactgtcctgtactgcagtgggagaaacattccaaacaggacccagatattaaccacact
gcccaggtggagctcctcggtttccatgacaataactcagtgttcagtagtgacactcct
tcgctgcaaagtgaaatctccgccctggatttggagaaaggcttgtccctgaatacagcc
ctgcaatcccaagtagatatctcccagcactgtgggatcaatctgctagatatcaacaca
gagctggcgtttatatcacaagatgagggctttacattttcatcacgtggcgaaacatcg
ttatctgaaacgacagacaaaggttcatttcaagagccggtgatggatctacttggattg
agttacaagatccagggcacacctctgagctcaccctgctctccctcacataccttgact
tcagtcttggtgtccttccatgatagcccaacctacacatgggcgacggagcccacgtca
cacgagcaagcccaaaccagctcctgtcatcacatcttccctaatcttctagatcctgct
ctacaccacactggagttgaacaggaaggtcctgagcctgacttgggacagcatggttcc
ctgctgccctcccaagaagaatggaaacaggggggctccagcaggaactctggactccag
ccccaggctctagaaagggtttctgatgagacaaccgcaggtgctgaattgtcttcagat
cagaagttctcatattgtgatccaatgcatgacaaacaagattgtgatgagaatgtatca
cagggtttagcgcatggcgagccaggtttagaccacaatttgttatcccaagaaaaagtg
cagggaaatgtagttttcaatcagaatttaacttatgaccagttgcatgacgcgcaaggt
ttgtgtctggatgcagtgcatggaaaaacagttttggacaagaggttatcccagaatata
ttgcacaaaactactgttttggaccaaaattctgtcctggatgtaatgcatgaaaaggaa
gttttggacccagatttgttccatgatgtagtcagttgtgaccaacccgttttggaccag
gacctttcagaacaggaatcttccccaagtttgttgcggactaacgcacggactcgggaa
tgtgtttctcccccgtcgggtcagttgctggctgagggggcagagtctgcagggggtggc
ccggatctgggggaggaggcagtggagctctccccactgagagctgtgtttgacgcgctg
gaccaggaccaggatggctttgttcgcatggaggaatttgtacagtttgctaccgtctat
ggagcagaacaggtgaaagatttaacccgtttcctggaccctggcggcctgggtgtgatc
agctttgaagatttctaccgtgggatcacagcgatcagcaatggaggctcggacagtccg
ctgtatgaaatggggttcagtcctggggcagagacagtcggctgccctgaggagtatgat
gattatgctgcctatgagcagaacgaggtgacggacagcgcgtacctgggctcagagagc
acctacagcgagtgtgagactttcacggacgaggacaccggcacgctggtgcaccaggag
atgcacgaggaggtggagacggacagcgctatcgacgcagcgctgtcctacactgaggag
ggggccaacgggccccaccagcaccatctctcgctgggctcggagctcaacaaccactct
ctggtgacagtgatcagtggggaagaggagcactttgaggacgtcggggagggccgtgac
tcgaagctgctagctgacacctccaccacggggcaggatgcggacaccagcttgaccagc
cagcttgagagctccatgctgctctcacccagcgctggttctttccctgcaagcttacag
agctttcttagggaggaggtgctggactttttttgtagccagtgtcacaaacaaattaat
cgccttgaggacctctctgcccgcctgaattaccttgaaatgaatagctccagcaagagt
ctttccagcaggaagatggcgaggcaccttcaccagaccagcacactaacactggacagc
atagaggacctgtcaagagacatcatggagttcgcagagactgatatgactgacaaggtc
atgttcttggagaaacgtgtgtcggagttggagaaggattcagcagcgaatggggagcag
catacccgtctgagacatgagaacctgcagctcgtacacagggcgaacgctctggaggag
cagctgaaggaacaggagtcccgctctgaggaggccctgctcactgagatccgccggcag
aaggaggtgctgtgcaaggtggagagagagcgcagcattgagatcgagaacctgcaagcc
aggttgcagcagctggacgaggagaacagtgagctgcagtcgtgccttccctgcctgcgc
gccaacatcgagaggttggaggaggagaggcggaagctccaggaccaggtggaggatgtg
actctgcgactcaacgaggagctggagagccggtgcaagatggcagacaagttggctcat
gagagacacaagaaccagaaggagaaggagtccacgcaggagctgatagaagacctgagg
aagcagctggagctcctgcagttgtacaagctggaggcggaggcgaggcgcgggcgatcg
gccagcgcggggctgcaggagtacaacagccgcacacgagaggcagagctggagcaggag
gtgcggagactcaaacaggataactgcagcctgaaggagcagaacgatgagctcaacggg
cagattatcaacctcagcatccagggagccaaaaacctcttctcggcctccttctcggaa
tcactagcagcagagatcaactcggtgtcacgtgacgagctgatggaagcgatccacaag
caagaggatatcaacctccgactgcaggagtacatcgaccggatcatcgtagctatcatg
gagtccaacccctctatcctggaggtgaagtag
DBGET
integrated database retrieval system
