Acipenser ruthenus (sterlet): 117431612
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Entry
117431612 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117431612
Spliceosome [BR:
arut03041
]
Common components
Common spliceosomal components
General mRNP proteins
117431612
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Dsh_C
Ig-CFAP74_2
Rtf2
Motif
Other DBs
NCBI-GeneID:
117431612
NCBI-ProteinID:
XP_033908623
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All DBs
Position
28:1756479..1766742
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AA seq
562 aa
AA seq
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MADDFDIEAMLEAPYKKTCLTISHLYSHEFTFDSSVNCQTDENKSSSANGHEERSKKKKK
SRSKSRSRSRDKKRSKSRDRKKSRERKTSKSHERKRSRSKERRRSKSRSKERGGRYRARR
SPFAGPKFNGGTRGKIGPPPTIKLSRRRSRSKSPFKKDKSPVREPIDNLTPEERDARTVF
CMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTGQ
RLLGVPIIVQASQAEKNRAAALANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGRI
ESIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDASNAS
SFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSIAFGAMAAVTDL
QARLTQPPDAAMNPGLNLALNLNPAMTLPTQPLATQCFQLSNMFNPQSENDPEWDVEIQD
DVIEECNKHGGVVHIYVDKNSPQGNIYVKCPAISAAMAAVSGLHGRWFAGKMITAAYVPL
ATYHNLFPESVMATQLLMPIRR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgattttgatattgaagccatgcttgaggctccttacaagaagacttgccta
acgatatctcacctctactcccatgaattcacctttgattccagtgtgaactgtcaaaca
gatgagaacaagtcaagtagtgccaatggacatgaggagcgcagtaagaagaaaaagaag
agtagaagtaaaagtcgcagcaggagccgcgacaagaagaggagcaaaagccgggatcgc
aagaagagccgcgagagaaagacgagcaagagtcatgagaggaagcgcagccggagcaag
gaacgccgccgcagcaagtcacgaagcaaagagaggggaggccgatacagagcacgcagg
agtccgttcgctgggccgaaatttaacggtggcaccagagggaagattggcccaccacct
accatcaaactaagtaggagacgttctagaagcaaaagcccatttaagaaagacaagagt
ccagtgagggagcctattgataatctaacccctgaagaaagagatgcacggacagtgttt
tgtatgcagctggcagccagaattcgaccaagagatctggaagagttcttttcagcagtg
ggaaaggtgagagatgtgaggatgatatctgacaggaactcaagaagatcaaaggggatt
gcttacatagaatttgtggaagcaagttctgtgccactggcaattggccttactggtcaa
aggctgttgggagttccaatcattgttcaagcatcacaggctgagaagaacagggcagca
gctttagccaacaacttacaaaagggtaatgctggaccaatgagactctatgtgggatct
ctgcacttcaatatcactgaggaaatgctgcgaggaatctttgaaccttttggcaggatt
gaaagtattcagttgatgatggacagtgaaactggacgatcaaaaggatatggcttcatt
acattttcagatgcagaatgtgctaaaaaggctttggaacagttgaatggatttgagctg
gctggcagacctatgaaagtgggacatgtcactgagcgcactgacgcatcaaatgcaagt
tcattccttgacagtgacgagctggaaagaactgggattgacttgggaactactggtcgt
ttgcagttgatggccaggctcgcagaaggtactggtttacagatcccgccagcagctcag
caggcacttcagatgagcggatcaatcgcctttggtgctatggcagctgtaacagattta
caagccaggcttacccaaccacctgacgctgctatgaatcctggcttgaacttagccctg
aacctgaaccctgctatgaccttaccgacacagcctcttgcaacacagtgcttccagctg
tccaatatgttcaacccacagtcggagaatgatccagaatgggatgtagagattcaagat
gatgtaattgaagaatgcaacaaacacggaggcgttgtacacatttatgttgataaaaat
tcaccacagggtaatatttatgtgaaatgtcctgctatttctgctgccatggctgctgtt
agtggattacatggacgatggtttgctggtaaaatgatcactgcagcctatgttccactc
gcaacctaccacaaccttttcccagagtctgtgatggctactcagctgctgatgcctatt
cgccgatga
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