Acipenser ruthenus (sterlet): 117431816
Help
Entry
117431816 CDS
T07327
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arut01002
]
117431816 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117431816 (usp42)
Enzymes [BR:
arut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117431816 (usp42)
Peptidases and inhibitors [BR:
arut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117431816 (usp42)
Ubiquitin system [BR:
arut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117431816 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117431816
NCBI-ProteinID:
XP_033909015
LinkDB
All DBs
Position
15:complement(6035084..6050146)
Genome browser
AA seq
1405 aa
AA seq
DB search
MTIVDKPTESSDPESGQSKPPGCLTPSSSGDMDSSSASWGTVSSALDAPKSKASSVGPTP
GAAVYSRSTAPVQEKPKPTIHKDQNLAGGGDGIAPPQKVLFPVEKLCLKWHQMHRIGAGL
QNLGNTCFLNSALQCLTYTAPLASYMLSREHSKTCHEAGFCMMCTMQNHITQAFANSGNV
IKPMSVINDLKRIAKHFRFGSQEDAHEFLRYTIDAMQKSCLSGNKLDRQTQATTLIHQIF
GGYLRSRVKCLNCKAVSDTFDPYLDVALEIKTVQSITKALEQFVKPEQLDGENAYKCTKC
KKMVPASKRFTIHRGSNVLTISLKCFANYNGGKITKDVRYPEFLDIRPFMSQSTGEPVIY
VLYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSPD
TKNGGDYNHSTRPPGQSSPRPIVSQRLGGTKQQTTGFIGPQLPPHMAKSSNHINGNGSMK
EIPCSSKASASNIGLKRMGSSQPSTSFQNRSLNRPTVIPEPTKRPKLTFQIGQSKSARPS
HSQPNFHSSPLDKLYKPSTSTSTVTHSSSSSSTAQSTSGAPSSTAPATVSQADTPPEPPC
SRVNGAPKRSANFLVPYAEESSEESDEEPGPVKENGYAKPLNGTVNGIRLGTFPTSSAIP
PPPDLGKNPSGVPHCKAELNGLTTMAVESEGTRLTAETVSCPLKHTKPIENGLPKTNGFK
HSDKLTSDMPDTLESIGASITNTPGPAKKPKLTSHFEQRGTTFPAAATVVNPCVDRVQNL
ENCSPASPVKDAVRSPAPELCDKTQEERAGNTTMNSKTSALDPGIHANCNTDNKPNPNRE
TQMFQIKSENKQPPEEEETTLKQSVARIEDPVQLQTSHSDNSTGLKNPVSCENVSKHVIL
NPTNCNISFRDKAKDQIKTYLETIKEESQEATLEHRQSPGKDRCAENRKLISRTGEQPSS
SAEREEKSRITELHLCSTEKDKHRLSDGEKRYRNKSSPYNERYSEDKSKLSEKYRYRSRS
RETTNHEKSRLHDKDYHPCKHQSHSRDRSRSRDRYYRDREKDRRWERHTYHCRDSYYRSK
EDLDRRFPQSSRDYEKSSSHYNRDWLYKEEPFSKPQWMDGTTSKENGCKDFGKQTHDYSK
GRLDSDHLQPSSSSHVKDKREHPKHESRRHYNDHDTEDSDSERKRRRHPRDESSEERRAR
KHKKSKKKKKSKHKYRDRDHRSHQDSSEANSDSDSWKHKKKKKHRSDGSDQEKPQRSQYR
KQNSKSGDESDSSNKASKSNDFRGIVGRTYSQKQYSEEKEELSHKEKNSQTESGHYTSSE
QHRGYRSSQSDAEMYRYPLNKVHMEAKAKSENGADCQSSLRLVIETGNHSGCKENRRQSE
IDSSYRDTARCKGSDKPFATEETAH
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaaccaacagagtcttctgaccctgagtctggtcagtccaagccc
cctggctgcctgaccccctcctcctctggagacatggactcaagctcagcgagttggggc
actgtatcatctgccttggacgcccctaaaagtaaagcctcttctgtaggaccgaccccg
ggagctgctgtttattccagaagtacagcacctgtgcaagagaaaccaaaacccaccata
cacaaggatcaaaacttggcagggggtggagatgggatcgctcctccacagaaagttcta
tttccagtggagaaactctgtctaaagtggcatcagatgcatcggattggagctggactc
caaaatctgggcaacacttgcttcctgaactcggctctgcagtgtctcacctacacagcc
ccccttgccagctacatgctgtcccgtgagcattccaaaacatgccacgaggctggattc
tgtatgatgtgcacaatgcagaatcatatcacccaggcctttgccaactctggaaatgtc
ataaagcccatgtctgtcataaatgacctgaagcgtattgccaagcatttccgatttggt
agccaagaggatgcacatgaatttctccgctacactattgatgctatgcagaaatcgtgc
ctgtcagggaacaagttggacagacaaacccaggccaccacattaatacatcagatcttt
ggaggatatttgcggtccagagtaaaatgtctgaattgcaaagcggtttctgacactttt
gatccatacctggatgttgctttggaaattaagactgtgcaaagcatcaccaaagctctt
gagcagtttgtaaagcctgaacagttggatggagaaaatgcttacaagtgtaccaagtgc
aagaaaatggttccagcttcaaaaaggtttacaatacacagaggttccaatgtgcttacc
atatccttgaagtgctttgccaactacaatgggggcaagatcacaaaggacgtgaggtat
ccagaatttctggatattcgtccattcatgtcgcagtccactggggagccagttatatat
gtcctgtatgcagttctagtgcattctgggtttagctgccatgctggacactactattgt
tacataaaggccagtaatggacagtggtaccagatgaatgattctatagtatccaccagt
gacatccggtcagtactcaatcagcaggcttatgtgctgttttacatcaggtctccggat
acgaaaaacggaggagattataatcattccacacgccccccaggacagtcctcccctcgc
cccatagtgagtcagcgcctgggtggcaccaagcagcagacaacaggcttcattggaccg
cagctcccccctcacatggctaagagttccaaccatatcaatggaaacggctccatgaag
gagatcccctgcagttccaaggcaagtgccagcaacattggtttgaagaggatggggtca
agccaaccttctacttctttccagaaccgctcactcaacaggcccaccgttattccagaa
cccactaaaaggccaaagctgaccttccaaattggacagagcaagtcggcacgtccttcc
cattcccagcccaacttccacagcagccccctggacaagctgtacaaacccagcacttcc
acatccaccgtcacccactcctcctcctcctcctctactgcacagtctacctcaggagca
cccagctctacggctcctgccacagtatcgcaagccgatacgccccctgagcccccttgt
tccagggtgaatggcgcccccaagcgtagcgccaacttcctcgttccatatgcagaggaa
tcctcggaagaatcagacgaggagcccggtccggttaaggagaatgggtatgcaaagccc
ctcaatggaaccgttaacggaattagattgggcacgttcccgacctcaagtgctattcct
ccacctccagacctcggaaagaatccttcgggtgtacctcattgcaaggcagagttgaac
ggcctgaccactatggcagtggagtctgaaggtaccaggctcacggctgaaacagtgagc
tgccctttgaagcatactaaacccattgagaatggcttgccgaaaaccaacggttttaaa
cacagtgataagctaacttctgatatgcctgatactctggaaagcattggtgccagtatt
acaaatacaccaggacctgctaaaaagccaaagctgacttcccatttcgaacagaggggg
acaacttttccagcagctgctactgttgtcaatccctgtgtggacagggttcaaaatctg
gaaaactgttcacccgcctctcctgttaaagatgcagtcaggtctccagcccctgaactg
tgtgataaaactcaagaagaaagggctggcaatactaccatgaacagcaaaacctctgcc
cttgaccctggaatccatgctaattgtaatactgataacaaaccaaaccctaatagggaa
actcagatgttccagataaagagtgaaaataagcaacctccagaggaggaggagacaact
ctcaaacaatccgttgcaaggatagaggaccctgtccagcttcaaacgagtcattcagat
aactccactggcttgaaaaatcctgttagctgtgaaaatgttagcaaacatgtcatatta
aaccctactaattgtaatatatcttttcgggacaaagcaaaggatcagatcaagacatat
cttgagactataaaggaagaaagtcaagaagccacattagaacacagacagtccccaggg
aaagacaggtgtgctgaaaacaggaagctgatatctcggacaggtgaacagccgagcagc
tcagcagaaagggaggagaaaagcagaatcacagaattgcatttgtgtagcactgagaag
gacaaacacagactatcagacggggaaaaacgttatagaaacaaatcttcaccttataac
gagagatacagtgaagataaaagtaagctttctgagaagtacaggtatcgatcgagaagt
agggaaacaaccaaccacgaaaagagcaggctgcacgataaagactatcatccctgtaaa
catcaatcccatagcagagataggtcccgtagtagggataggtattatagagacagagaa
aaggaccggaggtgggaaagacatacttaccactgcagagactcttactacaggtccaaa
gaggacctggacaggaggttccctcaaagcagtagggactatgagaagtcatccagtcac
tataacagggactggctttacaaagaagagcctttctccaaaccccaatggatggacggg
actacaagcaaagaaaacggttgtaaggactttggcaaacaaacacatgattacagcaag
ggcagattagattctgatcatttacaaccttcctcatcctcgcacgtcaaggacaagcgt
gagcatccaaaacacgagagcagacggcactacaacgaccatgacactgaagatagcgat
tcagagagaaaacggaggaggcacccgcgggacgagtcttcagaggagagaagagccagg
aaacacaaaaagtcaaaaaagaaaaagaagtccaaacataaatacagagacagggaccac
agaagtcaccaggattcctctgaagcaaactctgacagtgattcatggaaacacaagaaa
aagaaaaaacacaggagtgacggttcagatcaggagaaaccccagcgctcccagtacagg
aagcagaactccaagtctggggatgagtcggacagcagcaacaaggcatccaagagcaat
gacttcagagggatagtcggcaggacatacagtcagaaacagtattccgaggagaaggaa
gaactgtcccataaagaaaagaattcccagactgagagtggccattacacaagcagtgaa
cagcacagaggttacaggtcatctcaatcagatgctgaaatgtacaggtatcctttaaat
aaagttcacatggaagcaaaggcaaaatctgaaaatggagctgactgtcaatcttctctc
agactggtgattgaaacaggtaatcactctggatgcaaggagaacagaaggcagtctgaa
attgattcatcttacagggatacagccaggtgcaaagggagtgacaaaccatttgcaaca
gaggaaactgctcactaa
DBGET
integrated database retrieval system
