Acipenser ruthenus (sterlet): 117431993
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Entry
117431993 CDS
T07327
Name
(RefSeq) syndecan-4-like isoform X1
KO
K16338
syndecan 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04512
ECM-receptor interaction
arut04514
Cell adhesion molecule (CAM) interaction
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117431993
04514 Cell adhesion molecule (CAM) interaction
117431993
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117431993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117431993
Proteoglycans [BR:
arut00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117431993
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Paralog
GFIT
Motif
Pfam:
Syndecan
GlpR
Protocadherin
Merozoite_SPAM
Motif
Other DBs
NCBI-GeneID:
117431993
NCBI-ProteinID:
XP_033909252
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Position
24
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AA seq
223 aa
AA seq
DB search
MQKLCALLVLFFLASVYTESQVRETETWVPSDQKSGEDVDVSSGDFPNSSDFGFMNKDEL
DTYDDEDDEDDEDYEVSGSGDEDDDEEEEEEVVIENPKDYNDVVSKSQPDLNSNRIPEDE
RTVGKKNEVDEKELVSQNEVGVRSKAPRDDVDTNVLMASTSNESMFQRTEVLAALIAGGA
VGLVFAVLLVLLLIYRMKKKDEGSYELAKKPIYTKAPTAEIYA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaactctgcgcactcctcgtcttatttttcctggcatcggtttacactgaatcg
caggtgagggagacagaaacatgggtcccttctgatcagaaatcaggtgaagacgtcgat
gtctcctctggcgactttcccaacagctctgacttcggcttcatgaacaaggatgagctc
gacacttacgatgatgaggatgacgaagacgacgaggactacgaggtctctggttccggc
gatgaagatgatgatgaggaggaggaagaggaagttgtaattgagaatcccaaagactac
aatgacgtggtttcaaagtctcagccggaccttaacagcaacagaatccctgaagacgag
aggactgtcggcaagaagaacgaggtggatgagaaggagctggtgtcccagaacgaggtg
ggggtgaggagcaaggcgcccagggatgacgttgacaccaacgtgctcatggcaagcact
tcaaacgagagcatgtttcaaagaacagaggtcttagcagctctgatcgccgggggtgcc
gttggcctggtcttcgccgtcctcctcgtcctcctcctcatctaccgcatgaagaagaag
gatgaagggagctacgagctcgccaagaagcccatctacacgaaagcccccacagccgaa
atctacgcatag
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