KEGG   Acipenser ruthenus (sterlet): 117431993
Entry
117431993         CDS       T07327                                 
Name
(RefSeq) syndecan-4-like isoform X1
  KO
K16338  syndecan 4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04512  ECM-receptor interaction
arut04514  Cell adhesion molecule (CAM) interaction
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117431993
   04514 Cell adhesion molecule (CAM) interaction
    117431993
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117431993
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:arut00535]
    117431993
Proteoglycans [BR:arut00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   117431993
SSDB
Motif
Pfam: Syndecan GlpR Protocadherin Merozoite_SPAM
Other DBs
NCBI-GeneID: 117431993
NCBI-ProteinID: XP_033909252
LinkDB
Position
24
AA seq 223 aa
MQKLCALLVLFFLASVYTESQVRETETWVPSDQKSGEDVDVSSGDFPNSSDFGFMNKDEL
DTYDDEDDEDDEDYEVSGSGDEDDDEEEEEEVVIENPKDYNDVVSKSQPDLNSNRIPEDE
RTVGKKNEVDEKELVSQNEVGVRSKAPRDDVDTNVLMASTSNESMFQRTEVLAALIAGGA
VGLVFAVLLVLLLIYRMKKKDEGSYELAKKPIYTKAPTAEIYA
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcaaaaactctgcgcactcctcgtcttatttttcctggcatcggtttacactgaatcg
caggtgagggagacagaaacatgggtcccttctgatcagaaatcaggtgaagacgtcgat
gtctcctctggcgactttcccaacagctctgacttcggcttcatgaacaaggatgagctc
gacacttacgatgatgaggatgacgaagacgacgaggactacgaggtctctggttccggc
gatgaagatgatgatgaggaggaggaagaggaagttgtaattgagaatcccaaagactac
aatgacgtggtttcaaagtctcagccggaccttaacagcaacagaatccctgaagacgag
aggactgtcggcaagaagaacgaggtggatgagaaggagctggtgtcccagaacgaggtg
ggggtgaggagcaaggcgcccagggatgacgttgacaccaacgtgctcatggcaagcact
tcaaacgagagcatgtttcaaagaacagaggtcttagcagctctgatcgccgggggtgcc
gttggcctggtcttcgccgtcctcctcgtcctcctcctcatctaccgcatgaagaagaag
gatgaagggagctacgagctcgccaagaagcccatctacacgaaagcccccacagccgaa
atctacgcatag

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