Acipenser ruthenus (sterlet): 117432258
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Entry
117432258 CDS
T07327
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
arut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117432258
04120 Ubiquitin mediated proteolysis
117432258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432258
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117432258
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
U-box type E3
117432258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117432258
NCBI-ProteinID:
XP_034760629
LinkDB
All DBs
Position
23:complement(3487639..3516107)
Genome browser
AA seq
1324 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLSTPLTSPQRENPPGPPTAPSPAAPGPSHFLG
LSVHSMTPATSPIGASGVACRSQSSEGVSSLSSSPSNSLETQSQTLSRSQSMDIDSVSCE
KSMSQVDVDSGIENMEVEESDRREKRSLTDKESSSDSEVSEEQALQVICKILRVSWKERD
RDVIFLPLLAAEFTQDPKAVCSDFKDLIGQILMEVLMMSTQAREDNPFASLTATSQPIAA
AAKSPERHLVLNPSSSQGTSPMLTNVGSFGASSLSSLYGTSPNPQAVTSAVMTSPSPSQS
SAHLTVPSPISRSSPASSSAPLPISQRYRPYAVGYPWAFSTSPSPRSTAMSPPATAAFSS
SSPGISVSRSPQVMATSPQAVPASSPRPRRPTSLPPPLVPGSPSTAAQRPSLINRIPSSL
GASGGVVTDSGSDRFTIEACKETEMLNYLIERFESVGMEERKAPKMCSQPPASQLLSNIR
SQCISHAALVLQGALTQPRSLLQQSLLVPYMLCRNLPYGFIQELIRMTHQDEEVFKQIFV
PILQGLALAVKECSFDSDNFKYPLMALAELCEIKFGKAHPVCNLITSLPLWCPDSLSPGS
GRELQRLSYIGAFFSLSVFAEDDTKVGDKYFSGPAITLENTKLVSQSLQHYLESARGDLF
KILHNILLNGETREAALNYMAAVVNRNIKKAQMQTDDRLVSTDGFMINFLWVLQQLSMKI
KLETVDPFYIFHPKCRLNMTTDETRLKAPMEDLKSWLAELYDDPSKFPEPKFPTECFFLT
LHAHHLSILPGCRRYIRRLRAIRDLNRTVEELKNSESQWKDSPLATRHREMLKRCKTQLK
KLVRCKACADAGLLDENLLRRCLQFYGMVIQLILRIVDPAYPQITLPLNPEIPNIFAALP
EFYIEDVAEFLLFIVQYSPQVLYEPCTQDIVTFLIVFICSQNYIRNPYLIAKLVEVLFVT
NPAVQPRTQRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFK
SLWQNTAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQW
DLLPRDQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAML
NFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRE
LFEEVISKMTKAGIKSTIAVEKFKLLSEKVEEIVARNSQSEIDYSDAPDEFKDPLMDTLM
SDPVRLPSGNVMDRSIILRHLLNSPTDPFSRQNLTENMLESLPELKERIQAWMREKLNAG
RYSQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactgagtgctgatgagatccggagaagacgccttgcccgactcgcaggcgga
cagacctctcagcccaccacccctctcagcactcccctcacctctccacagagagagaac
cctcctggacctcccacagccccctcaccagctgcgcctggcccatcccacttcctgggg
ctcagcgttcacagcatgacccctgctacgtctcccatcggtgcatcaggagttgcttgc
cggagtcagagtagtgagggggtgagttctctcagcagctctccctcaaacagcctggaa
acccaatcccagaccctctccagatctcagagcatggacatcgacagtgtttcctgtgaa
aaaagcatgtcccaggtggatgttgactcaggaattgaaaatatggaggttgaggagagt
gaccgcagagaaaagaggagccttacagacaaggaatcttcttcggactctgaagtgtca
gaggagcaggcactccaggtcatctgtaagatcctcagagtctcctggaaggaaagggac
agggatgtcattttccttccgttacttgctgctgaattcacacaggatcctaaagccgtt
tgttcagattttaaggacttaattggccagattttaatggaagttctcatgatgtccaca
caagcgagagaggacaacccttttgccagtttgaccgctacatcacagccaatcgctgca
gctgccaaatctcctgaaagacatctggttctgaacccttcctcgagccaaggaacaagc
cccatgcttaccaatgtaggatcgtttggggccagctctctctcaagtctgtacgggact
agtccaaatccgcaggcagtcacctctgctgtgatgacttctccatctccatcccaatct
tcagcccatttgacagtgccgtctcccatctcccgctcctctcctgcgagttcttcagca
ccactgcccatttcccagaggtaccgtccatatgctgttggctacccctgggctttctcc
acctctcccagcccaagatccacagccatgagccctccagccactgcagctttctcctcc
tcctcccctgggatttctgtttcccggagtccacaagtcatggctacgagtccccaggct
gtcccagccagctctcctaggccacggcggcccacctcgctgcctccaccattagtccca
ggctctcccagcactgcggctcaacgaccctccctcataaacaggataccttctagcctt
ggtgcatcaggtggtgtcgtaactgattctggaagtgaccgctttaccattgaagcatgc
aaagagacagagatgctgaactacctcattgaacgctttgagagtgttggaatggaagag
aggaaagctccaaagatgtgcagccaaccacctgccagccaactgctaagcaacattcga
tctcagtgtatttcccatgctgctttggtgctacagggagcactcacacagccgaggtcg
ttgctgcagcagtctttgctagtaccgtacatgctgtgccggaacctgccttacggcttc
attcaagaactcattagaatgactcaccaggatgaagaggttttcaaacagatctttgtt
ccaatactacaaggattggcccttgctgtcaaagagtgttcctttgacagtgacaacttt
aaatatcctttaatggctttagctgaactctgtgaaataaagttcgggaaggctcaccct
gtgtgcaatttgatcacatcactgcccctgtggtgccctgattctctgagcccggggtca
ggcagagagctccagagactgtcatatattggcgctttcttcagcttgtctgtttttgct
gaagatgatacaaaagtgggagacaaatatttctcaggacccgcgattacccttgaaaat
actaaactggtcagtcaatccttgcagcattacctggaatcagcaaggggcgatcttttt
aaaatcctgcataacattttactgaatggggagaccagggaggctgctctaaactacatg
gcggctgtggtcaatcgaaacataaagaaagcgcagatgcaaacagatgacaggcttgtg
tccacagatggattcatgataaatttcctgtgggtccttcagcagctgagcatgaaaatt
aaactggagacagtcgatccgttttacattttccatccgaagtgccgtctaaatatgact
accgacgagacccgtctaaaagcccccatggaagatttgaagagctggttggcagagctt
tatgacgatccgtctaaatttcctgagccaaaattccctacagaatgctttttcctgacc
ctacatgctcaccacctgtctattcttcctggctgccggcgttacatacgaagactgaga
gcaatccgggatctgaacagaacagtagaagagttgaagaatagtgagagtcaatggaag
gattctcctctggcaacaagacacagagagatgctgaaaagatgcaagacccagcttaag
aaactggtgcgctgcaaggcctgtgcagatgcaggattgctggatgagaacttattgagg
agatgcctgcagttttatggcatggtgattcaactgattctgcgcattgttgacccagcc
tacccacagataacactacctttaaacccagagattcccaacatctttgctgccctgccg
gagttttacattgaagatgtggcagagttccttcttttcattgtgcagtattctcctcag
gttctgtatgagccttgcactcaggacattgtgacgttccttatcgttttcatctgtagc
caaaactatatcagaaacccttaccttatcgccaagctcgtagaggtcctgtttgtgaca
aacccggccgtccagccacgcacccagaggttttctgagatgatggagaaccatcccctg
tctatcaaacagttagtcccggcactgatgaagttttatacagatgttgaacacacagga
gctaccagcgaattctatgacaaattcaccatccgctaccacatcagcacaatcttcaag
agcctctggcagaacaccgctcaccatggcacgttcatggaggagttcaattctggaaag
cagtttgttcgctacattaacatgttgataaatgacaccaccttcttgctggatgaaagc
ctggagtccctcaaacgaattcatgaggtgcaggaggagatgaagaacaaggagcagtgg
gacctgctgcctcgggatcagcagcagagcaggcagtctcagttgacccaggatgagcgc
gtgtctcgttcataccttgctctcgcaacggaaacggttgacatgtttcatattctcacc
aagcaggttcagaaacctttcctccgacctgagcttggcccacgtttagctgccatgctg
aactttaaccttcagcagctgtgtggccccaagtgccgcgacctgaaagttgagaatccc
gagaagtatggttttgagccaaagaagctgctggatcagctaactgatatttaccttcag
ttagactgtgcaaggtttgccaaggctattgctgacgatcagcggtcctatagccgagaa
ctctttgaggaagtcatttccaaaatgacaaaagctgggatcaagtcaacaatagcagta
gaaaaatttaagctactgtccgaaaaggttgaagagattgtggccaggaattctcaatcc
gaaattgactacagcgatgcaccggacgagtttaaagatcctctgatggatactctgatg
agtgaccctgtccgactaccctctggaaacgtcatggaccgctccataatcttgcggcac
ttgttgaactcgcccacggacccattcagccgccagaatcttactgagaacatgctggaa
tcacttccggagttgaaagaaagaattcaagcatggatgagggagaagctaaatgctggc
cgctattctcaatga
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