Acipenser ruthenus (sterlet): 117432304
Help
Entry
117432304 CDS
T07327
Name
(RefSeq) interferon regulatory factor 7-like
KO
K09447
interferon regulatory factor 7
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut04623
Cytosolic DNA-sensing pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117432304
04621 NOD-like receptor signaling pathway
117432304
04622 RIG-I-like receptor signaling pathway
117432304
04623 Cytosolic DNA-sensing pathway
117432304
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117432304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117432304
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117432304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Forkhead
Phage_antitermQ
Motif
Other DBs
NCBI-GeneID:
117432304
NCBI-ProteinID:
XP_033909902
LinkDB
All DBs
Position
23:22124543..22134826
Genome browser
AA seq
475 aa
AA seq
DB search
MQCYLNPKTVQLIFCEKYCSCCELGWKILLDRCKTQTEMQSAAYQKPQFGKWLIDQINSG
QYPGLEWVDKDRFRIPWKHNSRKDCNDDDCMIFKAWAIASEKFHENQNDKAKWKTNFRCA
LNSLKNFIKIQDKSKESDDPHKVYQILEMPTDYVKTIKEDETAQQYVNPQPSPAPIIYPN
QRVPQYLQPEDAQQELLNEQLHTLNIGNQYPDHSRWDQLPTYGMPAEEYPIEPVPYAPDQ
VSQNAIPNHIPEQPYYAENELLLPDLNDLEITIYYRKQTVLFTQVRGPKVQLHYNKADPS
LGPERLVCFPGTEQLVDHRQIKYTQKLLNSIQRGLHLEVKPKGIYGTRLDKCHVYTAHNT
PVIEEPSKLPNNREVELFSFQKYLKDLFDFKENKRGSPDYTIYLCFGEKFPDGKPKETKL
ILVKVVPLVCRFWHEMAQRDGASSLQSGNISLQLSNNSLYELINSYMPDLEMFSV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgctatttaaaccccaaaaccgtgcaattaattttctgtgaaaaatattgttct
tgttgtgaattgggttggaagattttgctagatcgttgcaaaacacagacggaaatgcaa
agcgctgcttaccaaaagccacagttcggcaagtggctgatagatcagattaacagtggc
cagtacccagggctggagtgggtggacaaagaccggttccgcatcccttggaaacacaac
tccaggaaagactgcaatgatgatgactgtatgatattcaaggcttgggctatagccagt
gagaaattccatgaaaatcaaaatgacaaagccaaatggaaaactaacttccgctgtgcc
ttaaacagcctgaagaatttcataaagatacaagacaaatcaaaagagtcagatgatcca
cacaaagtctaccagattttagaaatgccaactgactatgtgaaaaccattaaagaggac
gagactgcacagcaatatgtcaacccccagccttccccagctcctatcatatacccgaac
cagcgtgtaccacagtacctacagcccgaggatgcgcagcaagaattgttgaacgagcag
ctgcacaccctgaatattggaaatcaatacccagaccactcgcggtgggatcagctaccc
acctatggcatgcctgctgaggaatatcccattgagcctgtaccctatgcaccagatcaa
gtctctcagaatgcaattccaaatcatatcccagagcagccctactatgccgaaaatgaa
ctcctcctgcctgatttgaacgatttggagattaccatctactaccggaagcagaccgtg
ctgtttacacaggtacgaggccccaaagtacagcttcactacaacaaggcggaccccagc
ctgggcccagagcggcttgtgtgcttccctggaacagagcagctcgtggaccacaggcag
attaagtacacccagaagctcctcaacagcatccagagaggcctgcacctggaggtcaag
ccaaagggcatctacgggacacgactagataagtgccacgtgtacacagcccacaacacg
cctgtgatcgaggagccaagcaagctacccaacaacagggaggtggagctttttagcttc
caaaaatacttaaaagatttattcgattttaaagaaaacaagcgcggctctccagattat
acaatttacctttgcttcggggagaagtttcctgacgggaaaccgaaggaaactaaatta
atcctagtgaaggtcgttcccctagtctgccgattttggcatgaaatggctcagagagac
ggggcatcttctttacagagcggcaacatcagcctgcagttatccaacaacagcctgtat
gaattaatcaattcctacatgcctgacctggaaatgttttctgtctaa
DBGET
integrated database retrieval system
