Acipenser ruthenus (sterlet): 117432361
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Entry
117432361 CDS
T07327
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5-like isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117432361
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117432361
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
117432361
NCBI-ProteinID:
XP_033910056
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Position
23:20846009..20889911
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AA seq
1224 aa
AA seq
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MPVIQEKQQNVALRRVTCSNCGENLEYPQGRNVEGVCRCFYTANESKVSPVQGIHKRDER
YNGCRSDNPRKREPMHHVGNIEFKGSGKKRGKFVIEHCTTDPAALYEVLTEEWNLTPPHL
VVSLVGGDEDFQMKPWLRDTLRKGLVKAAQSTGAWIVTSGLRVGITRHVGEAVRDHSLAS
TSSKVKVIAIGIAPWKMIHDKETLLTAKPGKPAFYETAEQPSGSLYSLDSNHSHFILVDE
DERHKDGTTEMRIKLLKHISEQRTGYRGTGIEIPVLCLLVHGQPHILERIYRGMLNSTPW
LILAGSGGIADILVDMMSRPCDPDNVQEQLQEKFHTEFAWTDILKCTKIIQIILEHRHLL
TIHNPGQEGSDELDTVILKALVKACKSQSQEAQEYLDELKLAVAWNRVDIAKSEIFSGEV
EWRPCDLEEVMMDALVSNKPDFVKLFIDNGMNMCDFLTYSKLQDLYCAIPPKCLLYQLLQ
KKHEETKLSISARNDSMADSLEQKPKFTLYEVSRVLKDFLHDSCKGFYQETTKRGTMERS
SINRVSHVQKASLNMNQKCENPWRDLFLWAVLQNRQEMANYFWATGPEAVAAALAGCKIL
KEMAHLESEAESARSMKEAKYEQFALDLFSECYTNSEDRAFALLVRKTKSWNKTTCLDLA
TEADAKSFFAHDGVQSHLTKMWWGAMKSDTRIWKLVLSFFCPPLIYTNLITFSEDEHHTV
DGAEQFKELDSQDSEKAMLLTQRQNSDTIKPEKQVTASNNVCMKFLFTRWKKFWGAPVTV
FLGNVIMYFAFLFLFTYVILVDFQPPPPYGPSIPEITLYFWVFTLVLEELRQSFFTDEDT
SIIKKFKLYVEDSWNKCDMVAILLFVLGVSCRMAWSTYEAGRTVLALDFMVFALRLIHIF
AIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDNRVDWIFRRVLYRP
YLHIFGQIPLEEIDGARMPEQNCTIDPIEIMKETFSPCPNLYANWLVILLLVIFLLVTNV
LLLNLLIAMFSYTFQVVQGNADIFWKFQRYNLIVEYFSRPSLAPPFIIISHISQVICSMF
KNAEPKQELLERDFPEGLDQKLMTWETVQKENYLANLEKEERESSEERLKKTSHKVDSLL
KIIGGFKEQEKRLVTVETQIKYCSDVLSWLADCFTQSSLKCNRAAPKHSSSMVSGSKKQQ
RCMAEEESTARTDILMTDLKYIDD
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaatacaagaaaagcaacagaatgtggctctgagaagagtaacatgcagcaac
tgtggggagaacctggagtatccgcaaggcaggaatgtggaaggtgtctgtcggtgtttc
tacaccgccaatgaatccaaagtatccccggtccagggaattcacaagagggatgaacgg
tacaatggttgtcgatccgataacccgaggaaaagagagcccatgcatcacgttgggaac
attgagttcaagggatctggaaagaagcgaggcaagtttgtgatagagcactgcaccaca
gacccagcagccctctatgaggtcctgacggaggaatggaacctgacacccccccacctg
gtagtgtcgctcgtggggggggatgaggacttccagatgaaaccctggctgagggacact
ttgaggaaggggcttgtgaaagcagcgcagagcactggtgcttggatcgtcaccagcggg
ctgcgtgtcggcatcaccaggcacgtaggagaggcagtccgggatcattcactggccagc
acctcttcaaaggtcaaggtcattgccattggaattgcaccctggaaaatgatccatgac
aaagagacattgctcactgctaagcctggcaagccggcattttatgagacagcagagcag
ccatctggctcattatattctctggacagcaaccactctcatttcatactggtggatgag
gatgagaggcacaaagatggaacaactgagatgagaatcaaactcctgaaacacatctct
gagcagcgcacagggtatagaggaactggtattgagatccctgtactttgcttactggta
catggacaaccacatattcttgagaggatatacagggggatgttgaactcaactccctgg
ctcatcctggcagggtctggggggattgctgacatcctggtggacatgatgagcagaccc
tgtgaccctgataatgtgcaggagcagctgcaggagaaattccatacagaatttgcatgg
acggacatcttaaaatgtacaaagattattcagattatcctagagcaccgtcacctctta
accatacacaacccaggacaggaaggatctgacgaacttgacacggtcattctgaaggca
ctagtaaaagcttgtaaaagccaaagccaagaagcccaggaatatctggatgagctgaag
ctggctgtagcctggaacagagtggacattgccaagagtgagatcttcagtggagaggtg
gaatggcggccttgtgacctggaagaagtcatgatggatgccttggtcagcaacaagccc
gattttgtgaagcttttcattgacaacgggatgaacatgtgcgacttcctgacatacagc
aaactccaggacttgtactgtgcaatccctccgaagtgccttctctaccaactcctgcag
aagaaacacgaggagaccaaactctccatatcagcacggaatgacagcatggcagattcc
ctagagcagaaaccaaagttcactctgtatgaggtctccagagtgctcaaagacttcctg
cacgattcctgcaaaggattttatcaggagaccaccaagagaggaacaatggaaagatcc
agtataaatcgagtcagtcatgtgcaaaaggcctcacttaacatgaaccaaaaatgtgag
aatccgtggagggatctctttctctgggcagtccttcagaacagacaggaaatggccaac
tacttttgggctacgggcccggaggcagtggcagcagctctagctggctgtaagatcctg
aaagagatggctcacctggaatcagaggcagagtctgctcgaagcatgaaggaggctaaa
tatgagcaattcgcactggacttgttcagtgaatgctacaccaacagtgaggacagggcc
ttcgctttgctggtcagaaagacaaagtcctggaacaaaaccacctgcctagacctggca
acagaagccgatgccaagtccttctttgcccatgatggtgttcagtctcacttgacgaaa
atgtggtggggagccatgaagtcagacacccggatatggaaactagtgctgtcattcttc
tgtcctcctctaatttacaccaacttaataacattcagtgaggacgagcatcacacagtg
gatggagcggagcagtttaaagaacttgacagccaggatagtgagaaggcaatgctgctc
acgcagaggcagaacagtgacacgatcaagcctgaaaaacaggtaacggccagcaataac
gtctgcatgaagttcctgttcacgagatggaagaagttctggggtgccccggtcactgtg
ttcctgggcaatgtcatcatgtactttgcgttcctcttccttttcacttatgtcatcttg
gtggacttccagccccctcctccctacggcccgtccatcccagagatcaccctctacttc
tgggtcttcaccctggtgttggaggagctgcgacagagtttctttactgatgaagacacc
agcatcataaagaagttcaagctctatgtggaagacagctggaacaagtgtgacatggtg
gccatcctgctgttcgtgctcggggtgtcttgcaggatggcatggtctacatacgaagca
ggccgtacagtcctggccctagatttcatggtgtttgctctccggttgattcacatcttc
gccatccacaagcagctcggcccaaagattataattgttgaaagaatgatgaaggatgtc
ttcttcttcctctttttcctgagtgtctggctcattgcctacggagtggccactcaagcc
ctgctgcaccccaacgacaatcgggtcgactggatcttccgacgcgtgctttaccggccc
tacctacatatatttggacagatcccactggaagagattgatggcgctcgcatgccagag
caaaactgcaccatcgaccccattgagataatgaaagaaacgttttccccgtgtcctaac
ctatatgcaaactggctggtcatcctattactggtcatcttcctcctggtcaccaacgtg
ctgctcctcaacctcctgatcgcaatgttcagttataccttccaggttgttcagggaaac
gcagacatcttttggaagttccagcgctacaacctgatagtagagtacttcagcagacct
tccctggcaccgcccttcattatcatcagccacatctcccaggttatctgcagcatgttc
aaaaatgcagagcccaagcaggagctcttagagcgagactttccagaaggtcttgatcag
aaacttatgacctgggaaacagttcagaaggagaactacctggcaaatctggagaaagag
gaaagagagagcagtgaggagagactgaagaaaacctctcacaaggtggattctctttta
aagattattggaggatttaaggagcaagaaaaacgactagtgactgttgagacgcagatt
aagtactgcagtgacgtgctttcctggcttgcagactgtttcacacagagcagcctcaag
tgtaacagagcagctccaaaacactcaagttccatggtgagcggttcaaagaagcagcag
aggtgtatggctgaggaggagagcactgccaggacagacattttgatgactgacttgaag
tacattgatgactga
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