Acipenser ruthenus (sterlet): 117432622
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Entry
117432622 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117432622
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117432622
Spliceosome [BR:
arut03041
]
Complex C
Other components
Complex C specific factors
117432622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
Cas3-like_C_2
AAA_19
nSTAND3
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
117432622
NCBI-ProteinID:
XP_033910490
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All DBs
Position
28:5200232..5212971
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AA seq
699 aa
AA seq
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MAVPWSTMKFWKPGTEGPGLSLNEEREATAEVGGSIVYNPHASLSIEKQRQKLPVFKHRN
YILYLLENYQTVVIVGETGCGKSTQIPQYLLEAGWAAEGKVVGVTQPRRVAAVSVAGRVA
EERGALLGHEVGYTIRFDDCSDAHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHER
TLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEQFRDFFNLNESGNPSKDTCGILTVEGR
TFPVDVFYTMSPVPDYVKATVETVMKIHESEGDGDVLAFLTGQEEVERVVSMLVEQSRVL
SRSGMKKHLRALPMYAGLPYSEQMKVFERVPHTVRKVVVATNIAETSITINGVVFVIDCG
FVKLRAYNPKTAIESLVVAPVSQASASQRAGRGGRNRAGKCYRLYTEEDFEKLPPSTVPE
MQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLLALGGLDEHGRLTEPLGM
RMAEFPLIPMFAKMLLESGSFGCSEEIVTIAAMMQIQNVFVSPPSQKKPAARKHRKFAVA
EGDHLTMLNVYEAFVKNRRSSQWCQEHFLNYKGLQRAAAVREQLWRLLSKFRVPKKSSEG
DPEVILRCIVSGFFANAARLHHSGAYRTLRDDHELHIHPTSVLYAEKPPKWVVYNEVMQT
SRYFLRDVSAIESSWLVELAPHFYRRGTHSSRSKKTKVV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgtggtccacaatgaagttctggaaacctggaacggagggtccaggtctc
agtctcaatgaggagcgcgaggcgactgcagaggtcggcggctctatagtctacaaccct
catgcctcgctgtccatcgagaaacagaggcagaaacttcccgtgttcaagcacagaaac
tacatattgtacctgttggagaactatcaaactgtggtgatcgttggagaaacaggatgt
gggaaaagcactcagattcctcagtatctcctggaggctggatgggctgcagaagggaaa
gtggtgggagtgacccaaccacgaagggtggctgcagtctcggtggctggtcgtgtggcc
gaggagagaggggcattgctgggccatgaggttggatacacaatacggtttgatgattgt
tccgatgcccatgccacacgcatcaagttcctgaccgatggaatgctggtgagagaaatg
atggcggatcctttattaaagaagtacagtgtcctgatgcttgacgaggctcatgaacga
accctctacacagacatcgctatcggacttctcaagaagattcagaagaagcgcggagat
ctgcgactgattgtggcgtcagctactctagatgctgagcaatttcgggatttctttaac
ctgaatgagtctggaaaccccagtaaggatacctgtggcattctaacagtggaggggagg
acattccctgtggatgtcttttatacaatgagcccggttcctgactatgtgaaggccaca
gtggagacggtgatgaagatccacgagtctgaaggagatggggacgtcctggcattcctc
accgggcaggaggaggtggagagagtggtgtccatgctggtagagcagtcccgggtcctg
tcccgctcggggatgaagaagcacctacgagctcttcccatgtacgcaggcctgccctac
tctgagcagatgaaggttttcgagagggtgccccacactgtgcgcaaggtggttgttgcg
accaacattgcagagacctccatcactataaacggcgtggtgttcgtcattgactgcggg
tttgtgaagctgagggcctacaaccccaaaacagccatcgagtccctggtagtggctcct
gtctcccaggcgtcggccagtcagagagcaggaagaggcggcaggaaccgggccgggaaa
tgttaccggctctatacagaagaagactttgaaaagttacccccatcgacagtccctgag
atgcagcgcactaacttggcccctgtgatcctgcagctgaaagccctggggatagacaac
gttctgaggttcagcttcctgtctcctccccctgcccagtccatggtacaggctctggaa
ctgctccttgcactcggagggttagatgagcatggacgactgactgagccgctgggaatg
cggatggctgaattccccctcattcccatgtttgcgaagatgttactggaatcggggagt
ttcggctgctctgaagagattgtgaccatcgcagccatgatgcagatccagaacgtgttc
gtctctccacccagccagaagaagccagctgccaggaagcacaggaagtttgctgtggca
gaaggggaccatctgaccatgctgaatgtttatgaggcctttgttaagaatcgcaggagc
tcgcagtggtgccaggagcacttcctcaactacaaagggctgcaaagagccgcagctgtg
agggagcagctctggagactgctgagcaagtttagagtacccaagaagtccagcgaaggt
gacccggaggttattctgcgctgcatcgtctcggggttctttgccaacgcggccaggctt
caccattcaggggcgtacaggacgcttcgagatgaccatgagctgcatattcatcccacc
tctgtgctctacgcggagaagcctcctaaatgggtagtgtacaatgaggtgatgcagaca
tccaggtacttcctgcgggacgtgtctgcaatagagtcctcttggctggtggaactggcc
cctcatttttaccggaggggaacgcattcatcgcgttcaaagaaaacaaaagtagtttga
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