Acipenser ruthenus (sterlet): 117432771
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Entry
117432771 CDS
T07327
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117432771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117432771
Enzymes [BR:
arut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117432771
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117432771
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
TAL_effector
Motif
Other DBs
NCBI-GeneID:
117432771
NCBI-ProteinID:
XP_034766749
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Position
35:complement(8616328..8626356)
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AA seq
442 aa
AA seq
DB search
MSGKDRVKSERRGSGPFSRTRSSLRNSESAERGKGGEKRRRSGVRGRKRSTAGELEGSAH
SVTPVLTPKRKKGQVTVKKEGEGNREKVKPRRQRRKSVKRGVKRESVDEPDSGTRPVKKG
TKKLKSEGIKKEEEEPLPVQPGSSAEREAEKGSVKMEGIRRKLIGAHMSIAGGLWNAVQG
SVTIGGCVFGMFLGSQRSWKSRPLDEKAVARFRQACSQHGFTPDRILPHGSYLLNCGSPK
PDVYEKSRAMLIDELKRCEQLGLTMFNFHPGSTLHDITVEECLDRIADSINHAHQHTTGV
TTVIENMSCQGNTVGGKFSELRGIIDRVKDKSRIGVCLDTCHAFAAGHDLSAVGGVKKML
DEFDWTVGLQYLKAVHLNDSKGKLGCHLDRHENIGEGEIGLEGFRQIMNEPRLDNMPMIL
ETPVRPDMDGSQEIQLLYSLCQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaaggacagggttaagtccgagcgcagggggagtggccccttctccaggaca
cgcagttcactgcgcaactcagagagtgcggagcgagggaaggggggagagaagaggcgg
aggagtggcgttaggggccggaagcgctctactgcaggggagctcgagggctcggctcat
tcggtcacacctgtcctcactcccaaacgaaagaagggacaagtgacggtgaagaaggag
ggagaggggaatagagagaaggtgaagccacgcagacagaggaggaaatcagtgaaacgt
ggagtgaaacgggagagcgtggatgaaccggacagcgggaccaggcctgtgaagaaggga
acgaaaaaactaaagagcgagggaataaaaaaggaggaagaagagccattgcctgtacaa
cccggctcatcagcggagagagaggcggagaaagggagtgtgaaaatggagggaataagg
aggaagctcataggagcccacatgtccatagcaggtgggctctggaacgctgtgcagggc
tccgttacgatcggagggtgtgtgttcggcatgttcctaggctcccagcgctcatggaag
agccggcccctggatgagaaggcagtggcccggttccgccaggcctgctcccaacacggc
ttcacccccgaccgcatactgccgcacgggtcatacctgctcaactgtgggtctcccaaa
cctgatgtctatgagaagagcagagccatgctcattgatgaactgaagaggtgtgagcag
ctgggcctgaccatgttcaacttccaccctggctccaccctccatgacatcacagtagag
gagtgtctggataggatagcagattccataaaccacgcccaccagcacaccactggagtc
acgacagttatagagaatatgagctgccagggtaacactgtcgggggcaagttctcagaa
ctgagagggattattgatcgagtgaaagataaatccagaattggagtctgtctggatacc
tgccatgccttcgcagctggtcacgacctctctgcagtgggcggggttaagaagatgctg
gatgaatttgattggacggttggactgcagtatctcaaggcagtgcatctcaatgactcc
aaagggaagctgggctgccatctggatcgtcatgagaacattggtgagggggagatcgga
ttggagggatttcgacaaatcatgaacgagcctcgcctggacaacatgcccatgatcctc
gagacgcccgtcaggcctgacatggacggctcacaggagatccagttgctctactctctg
tgccagtag
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