Acipenser ruthenus (sterlet): 117432944
Help
Entry
117432944 CDS
T07327
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117432944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117432944
03036 Chromosome and associated proteins [BR:
arut03036
]
117432944
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117432944
Coactivators
SAGA/TFTC/STAGA complex
117432944
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117432944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
117432944
NCBI-ProteinID:
XP_033910845
LinkDB
All DBs
Position
28:3987901..4001566
Genome browser
AA seq
1024 aa
AA seq
DB search
MAAGSDLLDEVFFNTEVDEKVVSDLVGSLESQLAGSGHGNSESRGPVVGNHIVSAGAGGN
ANVQESKMGLAQDLAKAGAGVQGGVINNTRSQGSALLDATTGITSSAGSETSPGLSHGKS
VVVSAMTTPVPDHGAGSSKTGTHAVQTLNGSNVTMNSHSSGSPAAASTVCNSSGSAPAVT
VVNNGPGSVVKGNVNTVLPATSNTVIQSSFFNAQSATSTVITSQTTSLGTGPTVTLVRPP
MHTAGPGTMLNGNNTVLNSTVNAANLPATVGSGISLQTSLLNSNPSPASVCASISTHVIK
SESPKTIIQTTPQAMAPSVVANAGNLSLGQPMHSGLQTVPPQQPSTPAGIGKGPVVQNVP
RTSTPTAVAANPGAIRAIVPQVLAPRMAQTPPNQPNIQNIQLPPGMVLVRSDSGQLLMIH
QQTLAQMQAQSQSQNAMAPRPATPTSTPPVQLQAPGTPMIARQVTPTTIIKQTSAAQTTV
QATTTLQRPPVVQPQIVLGGASTTASIGAASPVQPGTPQRTVPGATGATATETLENVKKC
KNFLSTLIKLASSGKQSSETAANVKELVQNLLEGKIEAEDFTSRLYRELNSSPQPYLVPF
LKRSLPALRQLTPDSAAFIQQSQLQQPSSQTSTALTAVVLGTSVQRSAGKATATLTSTLQ
PGHTKPGQLTPLVLPSQQQGTMVRPSQVTLTQTPMVTLRPPHNRIMLSTPQHVQLKPLQT
VPVMKHTVLPGNKGLPPGFAQASAAQRNKLKEAGGGSFRDDDDINDVASMAGVNLSEESA
RILATNSELVGTLTRSCKDEAFLSTASLHRRLLEIGKQYGIIELGPDIVNIVSHATQLRL
QSLIEKVTEIAQQRNITYKGCVSVLCLQEDERYEQISDVRSQLKFFEQLDQIERQRKEEQ
EREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKVG
SPGPGAGAEGSGSSGSLSGSPSVATARQFTRQRITRVSLRDLLHCLENESETSHSHLLYQ
AFLK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttgctggacgaggttttctttaacacagaggtggacgagaaa
gtagttagcgatctagttgggtccctggagtctcagcttgcgggttcgggtcacgggaac
tccgagagtcggggcccggtcgtggggaaccacattgtcagcgcgggagcaggaggtaat
gctaatgtccaagagagcaaaatgggacttgcacaagacctggcgaaagcaggagctgga
gtgcaggggggtgttattaataatacaaggtcccagggttcagcattactagatgcaaca
acagggatcacttcatctgcagggtctgagacatcgcccggactcagccacggcaaatct
gtggttgtcagtgccatgacaacccctgtgcccgaccatggagcgggcagcagcaaaacc
gggacgcatgcagtgcaaactttgaatgggagtaatgtaacgatgaactctcacagttca
ggaagtccagcagccgccagcaccgtttgtaacagcagcggcagtgcacctgctgtcaca
gtggtcaacaacggacctggatcggttgtaaaaggaaatgtaaatactgttttacctgcc
acctcaaacactgtcatacagagctctttttttaatgcacagagtgctacttcgactgta
attacgtctcagacaacgagtttgggaaccggaccaaccgtaacactcgtgaggccccct
atgcacacagccggaccgggcacgatgctaaatgggaataacaccgttttaaattcgaca
gttaatgccgctaacctccctgcgaccgtgggatctgggatctcgttacagacttctctt
ttaaacagcaacccgtccccagctagcgtttgtgccagcatctcaacccacgtaatcaag
tcggagtctcccaaaactatcatacaaactacaccgcaggcaatggcaccaagtgttgtt
gcaaatgcaggcaatttgtctcttggtcagcctatgcactctgggcttcagactgtaccc
cctcagcagccctccacacctgcaggaatcggcaagggtccggttgtccaaaacgtaccg
aggacttccactccaacagcagttgcggccaatccgggcgcgatacgagcaattgttcca
caggttttagccccccgcatggctcaaacacccccaaatcagccaaacatccagaacatt
cagctgcctccagggatggtgctggtgcgcagtgacagcggccagttgttgatgatccac
cagcagactctcgctcaaatgcaggcccagtcccagtcccagaacgccatggctccgcgc
cccgccacgcccaccagcactccccctgtccagctacaggcccctgggacacccatgatt
gccaggcaggtgaccccaacgaccataatcaagcagacctctgcagcccagaccacagta
caggccaccaccacactacagagacctcctgtcgtgcagccccagatcgtgctaggaggg
gcctccacaaccgcttcaataggagcagcgtccccggtgcagccaggaacaccacagaga
acagtaccgggggccacaggggccactgccacggaaaccttggaaaatgtgaaaaaatgt
aagaactttctatcgacgttaattaagctggcatcaagtggaaaacagtcctcagagacg
gctgctaatgtgaaggagctggtgcagaacctgttggaaggaaaaattgaagcagaagat
tttacaagcaggctttacagggaactcaattcttcacctcaaccatatcttgtgcctttc
ctgaagaggagtctacctgccttgcgccagctcaccccagactcggcagctttcatccag
cagagccagctccagcagcccagcagtcagaccagcacggcgctcacagcggtggtcctg
gggacgtcagttcaacgctcagccggaaaagccactgccaccctcaccagcaccctccag
cctgggcacaccaaaccagggcagctcacaccactggttctcccgtcacagcagcagggg
accatggtgcgcccatcccaggtaaccctgacgcaaacccccatggtgactctgaggccg
ccccacaatcggatcatgttgagtacgccgcagcatgtgcagctaaaacctcttcagaca
gtcccggttatgaaacatacagtattacctggaaacaaagggcttccccctggcttcgca
caggcctccgctgcacagaggaacaaactcaaagaagctggaggaggttccttccgtgac
gatgatgatatcaacgatgttgcatcaatggctggagtgaatctgtctgaagaaagcgcc
cggattctcgcgacgaactcggaactcgtgggcacgctaacgaggtcttgtaaagacgaa
gcatttctctcgactgcgtcgttgcatagaagactattagaaataggcaaacaatatgga
ataatagaactggggccagacatagtcaacattgtgtcacatgcaacccagctaaggtta
cagagcttaatagagaaagtaacagagattgcgcagcaaaggaatataacatacaagggc
tgcgtgtcggtgctgtgcttgcaggaagatgagcggtacgagcagattagtgatgtgcgc
tcacagctgaagttcttcgagcagctcgatcaaatagagagacagaggaaagaggagcag
gaaagagagattttaatgaaagcagcaaagtcacgatcacgtcaagaagacccagagcag
ctccggttgaaacagaaggccaaagagatgcagcagcaggagctggcacagataagacaa
agagacgccaacctcacagccttagcagcgataggaccgagaaagaagaggaaagtgggt
tcacctggaccgggggctggggcggagggctctggttcaagtgggtcgctttcaggcagc
ccttcagttgccacggcgaggcagttcactcgacaacggatcacacgggtcagcctcagg
gacctcctccactgtttggaaaacgagagcgagacaagccattcacatctgctataccaa
gcattcctgaagtag
DBGET
integrated database retrieval system
