Acipenser ruthenus (sterlet): 117432946
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Entry
117432946 CDS
T07327
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117432946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117432946
Enzymes [BR:
arut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117432946
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117432946
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
TAL_effector
Motif
Other DBs
NCBI-GeneID:
117432946
NCBI-ProteinID:
XP_034766747
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All DBs
Position
35:8487295..8499634
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AA seq
442 aa
AA seq
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MSGKDRVKSERRGSGPFSRTRSSLRNSESAERGKGGEKRRRSGVRGRKRSTAGELEGSAH
SVRPVLTPKRKKGQVTVKKEGEGNREKVKPSRQRRKSVKRGVKRESVDEPDSGTRPVKKG
MKKLKSEGIKKEEEEPLPVQPGSSAERETEKGSVKMEGIRRKLIGAHMSIAGGLWNAVQG
SVTIGGCVFGMFLGSQRSWKSQPLDEKAVARFRQACSQHGFTPDRILPHGSYLLNCGSPK
PDVYEKSRAMLIDELKRCEQLGLTMFNFHPGSTLHDITVEECLDRIADSINHAHQHTTGV
TTVIENMSCQGNTVGGKFSELRGIIDRVKDKSRIGVCLDTCHAFAAGHDLSAVGGVKKML
DEFDWTVGLQYLKAVHLNDSKGKLGCHLDRHENIGEGEIGLEGFRQIMNEPRLDNMPMIL
ETPVRPDMDGSQEIQLLYSLCQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaaggacagggttaagtccgagcgcagggggagtggccccttctccaggaca
cgcagttcactgcgcaactcagagagtgcggagcgagggaaggggggagagaagaggcgg
aggagtggagttaggggccgcaagcgctctactgcaggggagctcgagggctcggctcat
tcggtcagacctgtcctcactcccaaacgaaagaagggacaagtgacggtgaagaaggag
ggagaggggaatagagagaaggtgaagccaagcagacagaggaggaaatcagtgaaacgt
ggagtgaaacgggagagcgtggatgaaccggacagcgggaccaggcctgtgaagaaggga
atgaaaaaactaaagagcgagggaataaaaaaggaggaagaagagccattgcctgtacaa
cccggctcatcagcggagagagagacggagaaagggagtgtgaaaatggagggaataagg
aggaagctcataggagcccacatgtccatagcaggtgggctctggaacgctgtgcagggc
tccgttacgatcgggggctgtgtgttcggcatgttcctaggctcccagcgctcatggaag
agccagcccctggatgagaaggcagtggcccggttccgccaggcctgctcccaacacggc
ttcacccccgaccgcatactaccgcacgggtcatacctgctcaactgtgggtctcccaaa
cctgatgtctatgagaagagcagagccatgctcattgatgaactgaagaggtgtgagcag
ctgggcctgaccatgttcaacttccaccctggctccaccctccatgacatcacagtagag
gagtgtctggataggatagcagattccataaaccacgcccaccagcacaccactggagtc
acgacagttatagagaatatgagctgccagggtaacactgttgggggcaagttctcagaa
ctgagagggattattgatcgagtgaaagataaatccagaattggagtctgtctggatacc
tgccatgccttcgcagctggtcacgacctctctgcagtgggcggggttaagaagatgctg
gatgaatttgattggacggttggactgcagtatctcaaggcagtgcatctcaatgactcc
aaagggaagctgggctgccatctggatcgtcatgagaacattggtgagggggagatcgga
ttggagggatttcgacaaatcatgaacgagcctcgcctggacaacatgcccatgatcctc
gagacgcccgtcaggcctgacatggacggctcacaggagatccagttgctctactctctg
tgccagtag
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