Acipenser ruthenus (sterlet): 117433262
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Entry
117433262 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117433262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arut04054
]
117433262
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117433262
Pattern recognition receptors [BR:
arut04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
117433262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
HydF_dimer
Motif
Other DBs
NCBI-GeneID:
117433262
NCBI-ProteinID:
XP_033911266
LinkDB
All DBs
Position
31:complement(2028197..2037541)
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AA seq
680 aa
AA seq
DB search
MDLYKYQLEVIQPALEGKNVIIWLPTGGGKTRAAVYVAKEHLGRRRGAKVAMLVNKIHLV
DQHYNTEFKPFLNGTYSIAHISGDSDQKEFFAKVMRDNDVIICTAQILENALNSTEEEKH
VELTDFSLLIIDECHHTHKAGVYNKIMERYVEKKLLREEGLPQVLGLTASPGTGGAKNLD
AAKEHVLQICANLDACEIMSSKVHSAELQEKVPKPRKQYDVVHKRLQDPFGDKVKELMRM
IHSRIDCPDVTRNFGSQEYEQDIVLLEKKGAEEGNRRLRQSALHLRKYNDALLVNDTVRM
IDAFKILDTFHTNERATRGGLDDTDHFLFEVFQRSKVELQQLANTPEFENPKLTKLEDIL
LDQFQSLRESRGILFTKTRTSTHCLSDWIGTNPLLRGAGIKPSALTGAGFSNQTGHMTQR
KQQDTIQRFREGELNLLISTSIAEEGLDIPQCNLVVRYGLLTNDIATKQAQGRARAEDSL
YSVVAQSGGSELRREHTNEYLEDLAERAIKEVQRMAKRDYLLKIRDLQKKAIITRRLSQK
KTEEKRNMHDPDSVILHCSCCNIAVCHGSDLRVINGTHHVNINPQFEIYYKLGTKVFDKK
FEDWEPGCKIRGKDCGQEWGVEMIYKTITLPMLSIKNFVIETPSGTSSYKQWKGVNFRID
EFDYNDYCQSKFGNLLADLD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggatctatacaaataccagctggaggtgatccagcctgctttggaaggtaagaatgtc
attatctggctccctaccggcggtggaaagaccagggcagctgtgtatgtggcaaaggaa
catctaggaagaagacgtggggccaaggtagcaatgctggtaaataagattcacctggtg
gaccagcactacaacactgagttcaagccctttctgaacggcacatacagtattgcacac
atcagcggggacagtgaccagaaagagttctttgctaaagtcatgcgggacaatgatgtc
atcatctgcacagcacagatcttggagaacgccctgaatagcacagaggaagagaagcac
gtagagcttacagacttcagcctcctgataatcgacgagtgccaccacacccacaaggca
ggcgtgtacaacaagatcatggagcgctatgtggagaagaagctgcttcgagaagaaggg
ctgccacaggtgctgggcctgactgcatctccagggactgggggggccaagaacctggac
gcagccaaggagcatgtgctgcagatctgtgccaaccttgatgcctgtgaaataatgtcc
tccaaagttcattcagctgagctgcaagagaaggtccctaaacctagaaagcagtatgac
gttgttcacaagagactgcaggacccctttggagacaaggtgaaggagctcatgagaatg
atccacagccgtattgactgtcctgacgtcaccagaaacttcggctcccaggaatatgag
caggatatagtgttgctggaaaaaaaaggtgctgaggaggggaaccggcggctgcgtcag
agtgccctgcacctccgcaaatacaatgacgcgctgctggtcaacgacactgtgcgcatg
atcgacgccttcaaaatcctggacaccttccacaccaacgagagagcgacgcggggaggc
ctggacgacactgaccacttcctcttcgaagtctttcagcggagcaaagtggagttgcag
cagctggccaacacccctgagtttgagaaccccaagctgacaaagctggaagacatccta
ttggatcagttccagagcttgcgagagtcccgtgggatcctgttcaccaagacccgcacc
agcacccactgcctcagcgactggattggaaccaaccctctgctgagaggggcggggatc
aaaccatccgccctgaccggtgcaggattcagcaaccagactgggcacatgacccagcgt
aagcagcaggataccatccagaggttcagggaaggagagctgaacctcctgatttcgaca
agcattgcagaggaggggctggacatcccacagtgcaatctggtggtgcgttatggcctg
ctcaccaacgacatcgccaccaagcaggcgcaaggcagggcgcgtgctgaggacagtctg
tactctgtggtagcgcagagtggtgggagtgagcttaggcgcgagcacactaacgagtac
ctggaggatctcgctgagagagccatcaaggaggtgcagcgcatggcaaagagggactac
ctgctgaagatccgagacctgcagaagaaagccatcatcacccggagactgtcccaaaag
aagacggaggaaaagaggaacatgcatgaccccgacagcgtgattctgcactgctcctgc
tgcaacatcgcagtgtgtcatgggagtgacctacgggttataaatggcactcaccacgtc
aatatcaacccccagtttgagatttactacaaattaggtacaaaagtttttgataaaaaa
tttgaggactgggaacctggatgcaaaataaggggcaaggactgcggtcaggaatggggc
gtggagatgatctacaagaccataaccctgcccatgctctccatcaaaaactttgtgatc
gaaacgcccagcggcacatcttcctacaagcagtggaaaggagtcaacttccggatcgac
gaattcgactataatgactactgccagagcaagtttggaaatctactggcagatttagac
tga
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