Acipenser ruthenus (sterlet): 117433577
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Entry
117433577 CDS
T07327
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117433577
09123 Folding, sorting and degradation
03018 RNA degradation
117433577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117433577
03041 Spliceosome [BR:
arut03041
]
117433577
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117433577
mRNA degradation factors
5'-3' decay
Lsm complex
117433577
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117433577
Complex C
U2 snRNP components
117433577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
117433577
NCBI-ProteinID:
XP_033911820
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctactcgttctttaagtcgctggtggggaaggacgtggtggtggagctgaag
aatgatttgagtatctgtggaactctgcattcggttgatcagtatctgaacatcaagctt
acagacatcagtgtcacagacccggagaaatacccccacatgctttcagtgaagaactgt
tttatccgtggctccgtggtgcggtacgtacagctccctgcggacgaggtggacacacag
ctactgcaggacgccgctcgcaaagaggccatgcagcagaaacagtga
DBGET
integrated database retrieval system
