KEGG   Acipenser ruthenus (sterlet): 117433643
Entry
117433643         CDS       T07327                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117433643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arut03400]
    117433643
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117433643
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 117433643
NCBI-ProteinID: XP_034765339
LinkDB
Position
32:5537519..5564555
AA seq 665 aa
MPEIKVKHIVSCSSEDNTHKADNLLKADTYRKWKSARPGEKQISVILQFEKSEQIHSIDI
GNEGSAFVEVLAGNSTSIKEQDYEVILVTSSFMSPTESRNSNNLNRVRMFGPDKLVKANA
EKKWDRVKLICTQPYNKNISYGISFIRFHSPPDGTEDSAASPPKLTKLGQFRVKEEEPST
ASLKPGSLFFNRTAKPDTPPKTTPHSDKPTPSYATATLQSTGCAAPSATPDVEEKPATST
TASKQEPTPGKRKYEFSKERQPPAAKKQNSQNAQNPAENTRPKASPSQASTKKLKAEPVS
PSSPPQEKKPRKQEEKRKTKTKDSTEAEFSRLLEGNVFVLSGFQNPFRAELRDKALAMGA
KYRSDWTPDSTHLICAFASTPKYSQVKSLGGVIVRKEWILDCHKRRQSISFKRYLMDGAE
SSTEESEEDSEEEDSGKRRSSSNKQGWCELQRAGSPSANHKRVTPKKEQQRENAERPGTS
RAAGLVKGQPPPEEEDKFGGSTDEEKPGNGRDSREDSGMDTEDELRRVEAQNHSKKQGSR
RSAGEDDPYAGSTDENTDTEEPELDLPIPELPDFLTGKHFFLYGEFPKNERRMMIRYITA
FNGIIEEYMDEKVQYVITAQDWDETFEDALMENASLSFVKPRWLYVCNERQKLVPHQPYV
VVPQA
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgccagaaattaaagtaaagcacatcgtgtcctgtagcagcgaagacaatactcacaaa
gcagacaatctgttgaaagccgatacctacaggaagtggaagtctgccaggccaggagag
aagcagatatccgttatcttgcagtttgagaagtcggagcagatccacagtattgatatt
ggaaatgagggctctgcgttcgtggaggtgctcgccggcaactctacttcgatcaaagag
caggattacgaggtgatcctggtgacctcctccttcatgtcccccacggagagcaggaac
agcaacaatctgaaccgcgtccgcatgttcggaccggacaagctggtcaaggcaaacgcg
gagaagaagtgggaccgggtcaaactcatctgcacccagccttacaacaagaatatttcc
tatgggatctcatttataaggtttcactcgccaccggacggtactgaggattcagcagct
tccccaccaaaactaacaaaactaggccagttcagagtgaaggaggaagagcccagtact
gccagtctgaagcctggcagtctgttctttaacaggacggccaaaccagacacccctccc
aagaccacccctcacagtgacaagccaaccccgagctacgccactgccactctgcagtct
acgggctgtgcggccccaagcgccaccccagacgtggaggagaaaccagcaaccagtacg
accgcttcaaagcaggagccgacgccgggaaagaggaagtatgagttcagtaaagaaagg
cagcctcccgctgccaagaaacagaactcccagaatgctcagaaccccgctgaaaacacg
cgacccaaagctagcccttcacaagccagcaccaagaaactcaaagccgaaccagtcagc
ccatcatctcccccacaagagaagaaaccacgaaagcaggaagagaagagaaagaccaag
accaaggattcgacagaggcagagttctcccggctcctggaaggcaatgtttttgtgctc
agtggattccagaatccattccgggctgaactacgggacaaagcgctagccatgggggcc
aaataccggtccgactggaccccagacagcacccacctcatctgtgcctttgccagtacc
cccaagtacagccaggtgaagtccctagggggtgtgattgtgcgtaaggaatggatcctg
gactgtcacaaaaggagacagagtatctcttttaaacggtacctgatggacggagcggag
tccagcactgaagaatctgaggaagacagtgaggaagaggactctgggaagcgtcgatcg
tccagtaacaaacagggttggtgtgaattgcagagggcaggctcccccagcgctaaccac
aagagagtgactccaaaaaaggagcagcagagagagaatgcggagcgccctgggacgtca
agagcagccggactcgtcaagggccaaccgcccccagaggaggaggacaaattcgggggc
tccaccgatgaagagaagcctggtaatggccgggacagtcgggaggactcagggatggac
acagaggatgaactcagaagagtggaggctcagaaccacagtaagaagcagggatctcgg
cgctcagcaggagaagatgatccatacgcagggtcaacggacgagaacacagacactgaa
gagccagagctggaccttcctatcccagaacttccagatttcttgactggtaaacacttt
ttcctgtacggggagttcccaaaaaacgagaggagaatgatgatccggtatatcactgct
tttaacggaatcattgaggagtacatggatgaaaaagtgcagtatgtcatcacagcccag
gattgggacgaaacctttgaagacgctctgatggagaacgccagcctgtcgtttgtgaag
ccgcgctggctgtacgtttgtaacgagaggcagaaactagtcccccaccagccctacgtg
gtggtgccacaggcatag

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