Acipenser ruthenus (sterlet): 117434063
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Entry
117434063 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117434063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117434063
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117434063
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117434063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
U-box
zf-Nse
zf-ANAPC11
zf-UBR
Prok-RING_4
DUF4201
Motif
Other DBs
NCBI-GeneID:
117434063
NCBI-ProteinID:
XP_033912498
LinkDB
All DBs
Position
28:complement(3838447..3843045)
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AA seq
554 aa
AA seq
DB search
MSLSKPEKLFQEELTCPICLQVFSDPVVLPCGHNFCASCIGEVIEREAEKGQHTCPECRS
EHKGKAALQRNFKLCNIVEGFKASECTSAYQVLCDMCLEDALPAVKTCLKCEISLCALHL
KRHGEKKTFQSHSLVDPTADLSARKCSLHDKPLEYYCVEDRSCICVSCCIEGNHKNHDVK
SFKTAHAELRVVLESQLKEITAKLNLSERLLQNGKENESAAKAENAEMKQKAVELLDRFA
ELVANYKAHVIETIEAEQRPVVESLQQSIRRVTEQQNLLKHTQLQADSVWAERDEFLFIQ
KLLAIDSKLTEAIKEPLTEPTAKCLNKMQVCDSLEKKTTEIQAEMARIQRDLQALINPSQ
PLTFDPNTVHPNLILSADLKTARYTDVHQPYPNHAERFKGRFSQVRCSQGFSSGEHRWEV
EMGKCEWGVGVCYKSINGTSNPALGYNEASWSLEWYSNMLKAYTMSGSTPLQCITQPVRV
EVHLNYDAGTLSFYNASDSRVHLHTFNTTFTELVYPAVWITSSVQILDNSLDTSLTHFSR
LDSNAVTSLEHIIE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtctaaaccggaaaagctgttccaagaagaactcacttgtccgatctgtttg
caagtcttttctgatccggtcgtgctgccctgtggtcacaacttctgtgcttcttgtatc
ggggaagtgattgaaagagaagccgagaaaggacagcacacctgccccgaatgccggagc
gaacacaaagggaaagctgcgctgcagagaaacttcaagctttgcaacatcgtggagggg
ttcaaagcaagcgagtgcacctcagcttatcaagtgctctgtgatatgtgcttagaggac
gcactgcctgcagtgaaaacatgcctcaagtgtgaaatctcactgtgtgctctgcatcta
aaacgacacggggaaaagaagacttttcaaagccattctctagtggaccccacagcagac
ctcagtgcaaggaaatgctcactgcacgacaaacccctggagtattactgtgttgaagac
cggtcttgcatctgtgtctcctgctgcattgaaggtaatcacaagaatcatgacgtaaaa
agtttcaaaactgcgcatgctgaactgagagtagtactagaatcgcagctgaaagaaata
acagcgaaactgaatctgtctgagcgcctcctgcagaatggaaaggagaatgaatctgca
gctaaagctgaaaacgctgaaatgaaacagaaagccgtggagctgttagaccgctttgct
gaacttgttgccaattacaaagcacacgtgattgaaacgattgaagcggaacagcgcccc
gttgtggagagtctgcagcagagcatccgcagagtcacagagcagcagaatcttctgaag
cacacacagctccaagctgactccgtctgggctgaaagagatgagtttctgttcattcag
aagctcctggcaatcgattcaaaattaacagaagcaataaaagagcctttaacggaacca
actgcaaagtgtttaaacaaaatgcaagtctgcgatagtcttgagaagaaaacgacagag
atccaagcagaaatggcaagaatacagagagatctgcaggcattgattaacccatcgcag
ccgcttacattcgatccaaatacagttcaccccaacctgattctctccgctgatctcaag
acagcgcgttacactgatgtacatcagccgtacccgaaccatgcagagcggtttaaaggt
agatttagccaagttcggtgttctcagggcttctcgtcaggagagcatcgctgggaggtg
gaaatggggaaatgcgagtggggtgtgggggtctgttacaagagtattaacggcacttca
aatcccgcgctaggatataatgaagcatcctggagtttggaatggtattccaacatgctt
aaagcttacacaatgagcgggagcactccgcttcagtgtattactcaacctgtcagagtt
gaagtgcatttgaattatgatgcagggacgctgtcattttacaatgcaagtgacagccgg
gtacacctgcacacgtttaacacgacattcacagaactagtgtatcctgcagtttggatc
acatctagtgtacaaatcctggataactctttggatacatctctaacacatttcagcaga
ttggattccaatgcagttacaagcttagagcacattatagagtaa
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