Acipenser ruthenus (sterlet): 117434572
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Entry
117434572 CDS
T07327
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117434572
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117434572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
DUF5050
EGF_LRP2
EGF_CA
Syndecan
Motif
Other DBs
NCBI-GeneID:
117434572
NCBI-ProteinID:
XP_033913037
LinkDB
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Position
26:14773571..14852557
Genome browser
AA seq
1908 aa
AA seq
DB search
MQLAAVCGTLIASVLLIQAIAGNTECSCGRNHFTCAVNTFGECTCIPAPWQCDGDNDCGD
HSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHCQN
GYCIRSLWHCDGDNDCGDNSDEQCDLRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGSDE
ENCPSDVPMVTCSMEEFQCSYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCS
SGLCINAGWRCDGDSDCDDQSDEKNCTTSTCTTDQFRCKSGRCVRLSWRCDGEDDCSDNS
DEVGCEKTDSPQCAPDQFLCRNGRCIGQRKVCNEVSDCGDGSDESPHQNCRPRSSEETCN
VNNGGCAQKCQMARGLVQCTCHTGFRLKDDGRSCQDVNECSEEGYCSQGCTNTEGGFQCW
CVHGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSM
ELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVAN
VDGTHRMVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRIIADTNLFW
PNGLTIDYAGHKMYWVDAKHHVIERADLDGSNRKAVISQGLPHPFAITVFEDSLYWTDWH
TKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGNNNGGCSHLCLPSNK
TFTCTCPTGFQKIDNFNCAQSLDKFLLFARRTDIRRISFDTEDKSDDVIPLADVRSAVAL
DWDSKDEYIYWSDVTTDTINRAKWDGSRQQVVVDTSLESPAGLAFDWVTSKLYWTDAGTD
RVEVSNADGSMRTVLIWENLDRPRDIVVDPIGGYMYWTDWGANPKIERAGMDASNRIVII
SSNLTWPNGLAIDYETERLYWADAGMKTIEFSNLDGTDRQVLIGSQLPHPFGLTLYLDKI
YWTDWQSKSIQSANKLSGLGRVTLRENLENLMDIHMFHRHRSPVPTVCKVNNGGCSHLCL
LAPLPKGSSCACPTGINLQSDGKTCAHGMNSFLIFARRTDIRMVSLDIPYFADVVLAINE
SLKNTIAIAVDPKGGKVYWSDSTLKKISRSNLNGTEYEDIITTGLMTTDGLAVDAVGRKI
YWTDTGTNRIEVANLDGSMRKVLIWQNLDSPRAIALYHEMGYMFWTDWGEHAKLERSGMD
GTGRVVLISNNLGWPNGLAIDKAGSQLLWADAHTERIEAADLNGANRRTLVSPVQHPYGL
TLLGPHIYWTDWQTRSIQRTDKNTGGSSITVRGNLPGLMDIQAVDRDKPLGFNKCGVRNG
GCSHLCLPNPSSLSCSCPTGIQLKSDGRTCDDSPETYLLFSSRGSIRRISLDTNDHTDVY
VPVPELNNVISLDYDSVDGKVYYTDVYLDVIRRANLNGSTLETVIGHGLKTTDGLAVDWV
ARNLYWTDTGRNTIEVARLDGSNRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIER
SHLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESSDLNGKLRQILVSPVSH
PFALTQQDRWIYWTDWQTKSIQRVDKYTGRSKETILANVEGLMDIIVVSPQRQTGTNFCG
VNNGGCTHLCFARTTDFVCACPDESDGKPCSTIPGYVPPAPDTSTTSATQPDKYHKNPGV
STEKPTPPVHTPGKNCSVHGAGLANCNTERGDGPVPSDESSHMSYIIGGVLTVLAFLVLI
AAFIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETVQKPPIYNQLRCKKETGIDNS
YTKEKIKIVEGICLLSSDELYWEDLKQMKPSRGGILRDHVCMKTDTVSLQASSSGSLDDA
EMEQLLQEEQQSECSSVHTTTATTPERHSSLPDTGWEIQCKPSTESEV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgcagcggtttgtggcactctgatagcttccgtgcttttaattcaagccatt
gcaggaaacacggaatgctcatgtggacgaaatcatttcacgtgtgcggtgaataccttc
ggggagtgcacctgcattccagctccgtggcagtgcgatggggacaacgactgtggggat
cacagtgatgaagacgggtgcatgcttcctacctgctccccattggatttccactgcgac
aatgggaagtgtatccgccgttcctgggtgtgcgatggggacaacgattgtgaagatgat
tcggatgagcaagattgtcctccccgagagtgtgaagaggatgagttccactgccagaac
ggatactgtatccgcagcctttggcactgcgacggagacaatgactgcggagacaacagc
gacgagcagtgtgacttgaggaaatgttcagacaaggagttccggtgtactgatggaagc
tgtattgctgaacactggtactgcgatggagacacagattgcaaagacggatcagatgag
gaaaactgcccctctgatgttcccatggtgacatgcagcatggaggagtttcagtgctcg
tatggccgctgcatcctcgatatctaccactgtgacggcgatgacgactgtggtgactgg
tctgatgagtctgattgctcctctcaccagccctgcagatctggggagttcatgtgcagc
agcggcctgtgcatcaacgctggctggaggtgtgatggagactctgactgcgatgaccag
tccgatgagaaaaactgcaccacctccacttgtaccactgaccagttccgctgcaagtct
gggcgctgtgtgcggttgtcatggagatgcgacggggaagacgactgctcagataacagc
gacgaagtaggctgtgaaaaaacagattctcctcagtgtgctccagaccagttcctgtgt
aggaatggccgctgcatcggtcagaggaaggtgtgtaatgaggtcagcgactgtggcgat
ggcagcgatgagagcccccaccagaactgccgtcccaggtcgagtgaggagacttgcaat
gtgaacaatggtggctgtgctcagaaatgccagatggctcgaggactggtgcagtgcacg
tgtcacactgggttcaggctgaaggatgacgggaggtcatgtcaagatgtgaatgagtgt
tcggaagaaggctactgcagtcagggctgcactaacaccgagggaggtttccagtgctgg
tgtgtgcacggctatgaactccgacctgataaacgcagctgcaaagcattagggccagag
cctgttctgctgtttgccaaccggattgacatccgacaagtgcttccccaccgctccgag
tacacgctcctgctcaacaacctggagaacgccatcgctctggacttccaccacagcatg
gagctggtcttctggtcggacgtcacgctggacaggatcatgaaggccaacttgaacggg
agcaatgttgaggaggtggtgtcgacaggccttgagagtccaggtggtcttgcaattgac
tggatccatgacaagctgtactggacagactctggcacatctcgcattgaggtcgccaac
gtggatggcactcacaggatggtgctcctgtggcaaaacatggagaaaccacgagccata
gctctccacccaatcgaagggaagatctactggactgactggggcaacactccacggatt
gagtacgccaacatggacggctccaatcgcaggatcattgctgacaccaacctcttttgg
ccaaacgggctcactatcgactacgctggccacaaaatgtactgggtggatgccaagcat
catgtgatcgagcgagccgatctggatgggagcaacaggaaagcggtcatcagccaaggg
ttgccccatccctttgccatcactgtctttgaggacagtctgtactggactgactggcac
accaagagcatcaacagtgccaacaagttcacaggcaagaaccaggagatcatccgcaac
aaactccacttccccatggacatccacacactgcatccacagcggcagccagcgggaggg
agaaaccgctgtgggaacaacaatggtggttgcagccacctctgcctgcccagcaacaaa
acattcacctgtacttgtcccactggcttccagaagatcgacaatttcaactgtgctcaa
agtcttgacaagttcctgctttttgcccgaaggacggacatccgtcggatcagcttcgac
acagaggacaagtccgacgatgtcatcccgctggctgatgtgcgcagcgctgtggccctg
gactgggattccaaggatgagtacatctactggagcgacgtcaccaccgacactattaac
agggccaagtgggatggctccagacagcaggtcgttgtggataccagtctggagagtcca
gccggtcttgcttttgactgggtgaccagcaaactctactggacagatgcaggtacagac
agggttgaagtgtccaatgcagatggcagcatgaggactgtgctgatctgggagaacctg
gacagacccagggacatagtagtggatcccattggagggtacatgtactggacagactgg
ggagccaaccccaagatcgagcgggcagggatggatgcctcaaaccgcattgtcatcatc
tcctccaacctgacctggcccaatggactggcgattgactatgagaccgagaggctgtac
tgggcagatgctggcatgaaaaccatagagttctccaacttggatggcactgacagacag
gtgttgattggaagccagctgccccacccctttgggctgactttgtatctggacaaaatc
tactggacagactggcagtccaagagcatccagagtgctaataaactcagtggcctgggc
cgagtcactctgagagagaacctggagaacctcatggatattcacatgtttcaccggcac
aggtcaccagtgcccacagtgtgtaaagtgaataatggaggatgcagtcacctctgtctg
ctggctcccctgcccaagggctccagctgcgcctgcccaacaggaatcaacctccagtct
gatggaaagacctgcgctcacggcatgaacagcttcctgatttttgcacgaaggacagac
atccgcatggtttctttggacattccgtactttgccgatgttgttcttgcgatcaatgaa
tctttgaaaaataccattgccattgctgtggatcctaaaggagggaaggtgtactggtca
gacagtacgttgaaaaaaataagcagatccaacctgaatggaacagagtatgaagatatt
atcacaactggtttaatgacgacggatggactggcggtggatgctgtgggccgtaagatt
tactggactgacactgggaccaaccggattgaagtcgccaatttggatggatcaatgaga
aaagttcttatttggcaaaatctggacagcccgagggccattgcactctaccatgaaatg
ggatatatgttctggactgactggggagagcatgcaaagctggaacgttctggaatggac
ggaacaggccgcgtggtactcatcagtaacaacctgggctggcccaatggactggccata
gacaaggcagggtcccagttactgtgggctgatgctcatactgagcgtatcgaggcagct
gacctgaacggtgccaaccgtcgaactctggtctccccggttcagcacccctacggactg
accctacttggcccacacatctactggacagactggcagacccgcagcatccagagaaca
gacaagaacacgggcggcagcagcatcactgtgcgtggaaacctgcctggcctcatggac
attcaggctgtggaccgggacaagcccctgggctttaataagtgtggtgtgagaaacgga
ggctgcagccatctgtgcctccccaatcccagcagcctctcctgctcgtgccccacgggg
atccagctgaagagcgatgggcggacatgtgacgactcccccgagacatacctgctcttc
tctagccgtggcagcatccgccgcatctccctggacaccaacgaccacactgacgtctac
gtgccggtgcctgagctcaacaacgtcatctcactggactacgacagcgtggacggcaag
gtctactacacagacgtgtatctcgacgtcatcaggcgcgccaacctgaatggaagtacc
ttggagactgtgattggccacggcctgaaaacgacggacgggctggcggtggactgggtg
gctcggaatctatactggacagacacaggcaggaacaccatcgaggtagcccggctggac
ggctccaatcgcaaagtgctcattaacaacagtctggacgagcccagggccatcgctgtg
ttcccaaggaaggggtatctattctggactgactggggtcacattgctaaaattgagagg
tcacacctggatggttctgagcgcaaggtcctcatcaatactgacctgggctggcccaat
ggattgactctagactacgacacccgaaggatctactgggtcgatgcacacttagaccgg
atagagagttctgatctcaatggaaaactgcgccagatcttagtcagccctgtctcccac
cccttcgccctcacacagcaagaccgatggatttattggactgactggcagacaaagtct
attcagcgagtagacaagtacacaggaaggagcaaggagaccattcttgccaatgttgag
ggactcatggacattattgtagtgtcaccacagcggcagactggtaccaacttctgcgga
gttaataatggaggttgcactcacctttgctttgccagaaccacagattttgtttgtgcc
tgtccggacgaaagtgatggaaaaccttgttccacaattccaggttatgtaccgccagct
cctgacacttctacaacaagtgctactcagcctgataaatatcacaagaaccctggtgtc
tccacagagaaacccacaccacctgtccatacacctggaaaaaattgctctgtacatggt
gcaggtcttgcaaactgtaacactgagcggggtgatggtccagtcccctctgatgaaagt
tcgcacatgagttacatcattgggggagtcctaaccgtgctggccttcctcgttcttatt
gctgcctttatcatatacaggcacaaaaagtcaaagtttgcagatccaggagtgagcaac
ctgacttacagtaacccatcataccgcacctccacgcaagaggtgaaaatagaaacggtg
cagaagccacctatttataaccagctacgatgtaagaaagagaccggcattgacaacagt
tacaccaaggagaagatcaagatcgtggagggaatctgcctgctgtccagcgacgagctg
tactgggaggacctgaagcagatgaagccctcgcggggtgggatcctgcgggaccacgtc
tgcatgaagacggacacggtgtccctgcaggccagcagcagcggctcgctggacgatgca
gagatggagcagctgctgcaggaggagcagcaatctgagtgcagcagcgtccacaccacc
acggcgaccacgcccgagcgacacagctctctgccagatacaggctgggagatccagtgc
aagccctccactgagagcgaggtctga
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