KEGG   Acipenser ruthenus (sterlet): 117434616
Entry
117434616         CDS       T07327                                 
Name
(RefSeq) protein CASC3-like
  KO
K14323  protein CASC3
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
arut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117434616
   03015 mRNA surveillance pathway
    117434616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117434616
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117434616
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 117434616
NCBI-ProteinID: XP_034762656
LinkDB
Position
26:25476632..25488568
AA seq 760 aa
MADRRRRRKRASQDSEDEDESGSGTGTAGSGSAATKNRVRVPEPVALPPISVRVKADREH
ESECESEDGIEGDVVLSDYESAEENGSRSEAEEEEEGQGGGGGGGEEEEFSQEETPEQPV
ESEPVSGEQGGAVEEETEAALSKEEKAQEKGKTLAGERQSGDGQESTETPESKPGDEPGS
KLDDDEDRKNPAYIPRKGLFFEHDVRGAAQEEDMRPKGRHKKLWKDEGRWVHDKFREDEQ
APKSREELVSVYGYDIRHASGPSDLQPQRCRKPRYSGSPPPGRDKRWHDAEKPNRVPWHS
SGTTNHHPPPPSPQQQHGTPQSSRPYGAARNSTGGSGRVSQQPRTFQNSRTAPSNPSPSS
SAYREGRTNFKPAEQHGYSERERDRNYSNNHRTRSKYEPQSSPNVVVEEYQDEGGEGEWE
GRETKESYCSRQSQERDFTAPSRRKEEEEEEGSGVHPDTAFPARDRGGASSPLPPSPAAA
PERTVEKKSYSRARRTRNKASEIGKQASVEEPLHPLQLGGTLPDSAAQVPPPQKAQLTPP
AHPVVKAESWEPPLEGVGGAGGGGGLEHEMACMNLSAQQSWAPSQPPYIPGEMRGIPNQM
HMGAASHQYSRIDEMGVGVGRAKRYSSQRQRPVPEPAAMHIGIMEGHYYDPLPFQGPIYT
HSESPASLPPQGMMVQPEMHLAHPGLHPHQPPAPLPNPGLYAGPPVSMSPGQPPPGPLLA
PAYYSPPGVMAFSNTNFSYPAGATLPPMYPNPQVSTAETL
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggctgacaggcggcggcggcgtaagcgcgcgtcccaagacagcgaagatgaggatgag
tccggctccggtaccggtaccgcggggtccggttcggccgcgacgaagaacagggtccgg
gtcccagaacccgtggcactgccgccgataagcgtcagggtgaaggcggacagggaacac
gagtcggagtgtgagagcgaagatggcatagaaggggatgttgtcttgtctgattatgaa
agtgcagaagaaaatggctctcgctccgaggccgaggaggaagaggagggacagggggga
ggaggaggaggaggagaagaagaagagttcagccaggaggagacacccgagcagccagtg
gagagcgagccggtctctggagagcaggggggcgcagtggaggaggagactgaggcagcc
ctgagcaaggaggagaaagcacaggagaaggggaagacgctggcaggggagaggcagagt
ggagatggacaggagagcacagagacaccggagagcaagcctggggatgaaccggggagc
aagctggacgatgacgaggatcgcaagaacccggcctacatcccccgcaaggggctgttc
ttcgagcacgacgtgaggggggcggcgcaggaggaggacatgcgaccgaaggggcgccac
aagaagctgtggaaggacgagggccgctgggttcacgacaagttccgcgaggacgagcag
gcacccaaatcccgcgaggagctcgtctccgtgtacggctacgatatccgccacgcgagc
gggccctccgacctccaaccccagcgctgccgcaaacccaggtacagcggcagcccccct
ccggggcgggacaagaggtggcacgacgcggagaagccgaaccgtgttccgtggcactcc
agcggcaccaccaaccaccaccccccacctccctcaccgcagcagcagcacggcacaccc
cagtcctcgcggccttacggggcagcccgcaactccacaggggggtccggacgcgtctcc
cagcaaccgcgcaccttccagaacagcaggactgcccccagtaacccctcgccctcctcc
agtgcttacagagaaggacgcacgaacttcaagcctgcagaacagcacggttacagcgaa
cgagagcgcgaccgaaactacagcaacaaccaccgcacccgctccaaatacgagccccag
tcttctcctaacgtggtggtggaggagtatcaggatgaagggggcgagggggagtgggag
ggaagagagacgaaggagtcttattgttccagacagtcccaggagagggatttcacagcc
ccgtcccggaggaaggaggaggaggaggaggagggcagcggcgttcacccagacacggct
ttcccagccagggatcggggtggcgcctcctcccctctccctccgtctcctgccgcggct
cctgaaaggactgtggaaaagaagtcgtattcccgagccaggaggacccggaataaggct
tcggagattgggaagcaggcttcggtggaggagcccctgcatcccctgcagctcgggggg
accctgccggactctgctgctcaggtgcccccccctcagaaggcccagctgaccccccca
gcccacccggtggtgaaggcggagtcctgggagccccccctcgaaggggttggaggggcg
gggggcggtgggggactggagcacgagatggcctgtatgaacctgagcgcacagcagagc
tgggccccaagccagcctccctacatccccggagagatgaggggcattcccaatcagatg
cacatgggagccgcctctcatcagtacagcaggatcgatgagatgggtgtgggagtgggc
cgagcgaagcgttactcctcccagcggcagcgcccagtccccgaacccgcagccatgcac
atcggcatcatggagggacactactacgacccgctacctttccaaggaccaatctacact
cacagcgagagccccgcctccctccccccgcagggcatgatggtccagcccgaaatgcac
ctggcgcacccaggtctgcacccccaccagccccccgccccgcttccgaaccctggtctg
tacgccggcccccccgtctctatgtctccagggcagccccccccaggaccgctcctcgca
cccgcgtactactcccccccgggggtgatggccttcagcaacacaaacttctcctaccct
gctggagccacactgccccccatgtaccccaaccctcaggtcagcactgccgaaaccctg
taa

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