Acipenser ruthenus (sterlet): 117434616
Help
Entry
117434616 CDS
T07327
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117434616
03015 mRNA surveillance pathway
117434616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117434616
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117434616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117434616
NCBI-ProteinID:
XP_034762656
LinkDB
All DBs
Position
26:25476632..25488568
Genome browser
AA seq
760 aa
AA seq
DB search
MADRRRRRKRASQDSEDEDESGSGTGTAGSGSAATKNRVRVPEPVALPPISVRVKADREH
ESECESEDGIEGDVVLSDYESAEENGSRSEAEEEEEGQGGGGGGGEEEEFSQEETPEQPV
ESEPVSGEQGGAVEEETEAALSKEEKAQEKGKTLAGERQSGDGQESTETPESKPGDEPGS
KLDDDEDRKNPAYIPRKGLFFEHDVRGAAQEEDMRPKGRHKKLWKDEGRWVHDKFREDEQ
APKSREELVSVYGYDIRHASGPSDLQPQRCRKPRYSGSPPPGRDKRWHDAEKPNRVPWHS
SGTTNHHPPPPSPQQQHGTPQSSRPYGAARNSTGGSGRVSQQPRTFQNSRTAPSNPSPSS
SAYREGRTNFKPAEQHGYSERERDRNYSNNHRTRSKYEPQSSPNVVVEEYQDEGGEGEWE
GRETKESYCSRQSQERDFTAPSRRKEEEEEEGSGVHPDTAFPARDRGGASSPLPPSPAAA
PERTVEKKSYSRARRTRNKASEIGKQASVEEPLHPLQLGGTLPDSAAQVPPPQKAQLTPP
AHPVVKAESWEPPLEGVGGAGGGGGLEHEMACMNLSAQQSWAPSQPPYIPGEMRGIPNQM
HMGAASHQYSRIDEMGVGVGRAKRYSSQRQRPVPEPAAMHIGIMEGHYYDPLPFQGPIYT
HSESPASLPPQGMMVQPEMHLAHPGLHPHQPPAPLPNPGLYAGPPVSMSPGQPPPGPLLA
PAYYSPPGVMAFSNTNFSYPAGATLPPMYPNPQVSTAETL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaggcggcggcggcgtaagcgcgcgtcccaagacagcgaagatgaggatgag
tccggctccggtaccggtaccgcggggtccggttcggccgcgacgaagaacagggtccgg
gtcccagaacccgtggcactgccgccgataagcgtcagggtgaaggcggacagggaacac
gagtcggagtgtgagagcgaagatggcatagaaggggatgttgtcttgtctgattatgaa
agtgcagaagaaaatggctctcgctccgaggccgaggaggaagaggagggacagggggga
ggaggaggaggaggagaagaagaagagttcagccaggaggagacacccgagcagccagtg
gagagcgagccggtctctggagagcaggggggcgcagtggaggaggagactgaggcagcc
ctgagcaaggaggagaaagcacaggagaaggggaagacgctggcaggggagaggcagagt
ggagatggacaggagagcacagagacaccggagagcaagcctggggatgaaccggggagc
aagctggacgatgacgaggatcgcaagaacccggcctacatcccccgcaaggggctgttc
ttcgagcacgacgtgaggggggcggcgcaggaggaggacatgcgaccgaaggggcgccac
aagaagctgtggaaggacgagggccgctgggttcacgacaagttccgcgaggacgagcag
gcacccaaatcccgcgaggagctcgtctccgtgtacggctacgatatccgccacgcgagc
gggccctccgacctccaaccccagcgctgccgcaaacccaggtacagcggcagcccccct
ccggggcgggacaagaggtggcacgacgcggagaagccgaaccgtgttccgtggcactcc
agcggcaccaccaaccaccaccccccacctccctcaccgcagcagcagcacggcacaccc
cagtcctcgcggccttacggggcagcccgcaactccacaggggggtccggacgcgtctcc
cagcaaccgcgcaccttccagaacagcaggactgcccccagtaacccctcgccctcctcc
agtgcttacagagaaggacgcacgaacttcaagcctgcagaacagcacggttacagcgaa
cgagagcgcgaccgaaactacagcaacaaccaccgcacccgctccaaatacgagccccag
tcttctcctaacgtggtggtggaggagtatcaggatgaagggggcgagggggagtgggag
ggaagagagacgaaggagtcttattgttccagacagtcccaggagagggatttcacagcc
ccgtcccggaggaaggaggaggaggaggaggagggcagcggcgttcacccagacacggct
ttcccagccagggatcggggtggcgcctcctcccctctccctccgtctcctgccgcggct
cctgaaaggactgtggaaaagaagtcgtattcccgagccaggaggacccggaataaggct
tcggagattgggaagcaggcttcggtggaggagcccctgcatcccctgcagctcgggggg
accctgccggactctgctgctcaggtgcccccccctcagaaggcccagctgaccccccca
gcccacccggtggtgaaggcggagtcctgggagccccccctcgaaggggttggaggggcg
gggggcggtgggggactggagcacgagatggcctgtatgaacctgagcgcacagcagagc
tgggccccaagccagcctccctacatccccggagagatgaggggcattcccaatcagatg
cacatgggagccgcctctcatcagtacagcaggatcgatgagatgggtgtgggagtgggc
cgagcgaagcgttactcctcccagcggcagcgcccagtccccgaacccgcagccatgcac
atcggcatcatggagggacactactacgacccgctacctttccaaggaccaatctacact
cacagcgagagccccgcctccctccccccgcagggcatgatggtccagcccgaaatgcac
ctggcgcacccaggtctgcacccccaccagccccccgccccgcttccgaaccctggtctg
tacgccggcccccccgtctctatgtctccagggcagccccccccaggaccgctcctcgca
cccgcgtactactcccccccgggggtgatggccttcagcaacacaaacttctcctaccct
gctggagccacactgccccccatgtaccccaaccctcaggtcagcactgccgaaaccctg
taa
DBGET
integrated database retrieval system