Acipenser ruthenus (sterlet): 117434648
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Entry
117434648 CDS
T07327
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117434648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117434648
03036 Chromosome and associated proteins [BR:
arut03036
]
117434648
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117434648
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117434648
PBAF complex
117434648
GBAF(ncBAF) complex
117434648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
117434648
NCBI-ProteinID:
XP_033913136
LinkDB
All DBs
Position
26:19425381..19452049
Genome browser
AA seq
514 aa
AA seq
DB search
MATRGGYPMNAGSPMNLGGNPMNPNINPMNSGQGGLRIPHAMQQNPGYRTMGTGASPYHQ
RQGMPPGRGMPMPGMGPVPGPSYGSGMPMRPGMLQQGMDPFRKRLLQQQQQQQQQHHGMH
NQRRGIKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIT
QKRKLRIYISNTYTPAKPEGDEAEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELD
KELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLMLMLDHQPPQYKLDPRLARLL
GVHTQTRANIMQALWLYIKNNKLQDSHEKEHINCNRYFRQVFNCNRMRFCEIPMKLAGLL
QHPDPIIINHMISHAECVDPNDQKKTACYDIDVEVDDPLKGQMSSFLSSTTNQQEIAALE
VKIHETIESINHLKTQRDFMLSFSNNPQEFIQDWLKSQCQDLKLMTDTVGNPEAERRSEF
YEEPWAQEAVGRYVFSKVQQRRQELEQVLGIRLT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagaggagggtaccccatgaatgctggtagtcccatgaatttagggggtaac
cctatgaatcctaatattaaccctatgaattcgggtcaaggtggtcttcggatccctcat
gcaatgcaacagaatccaggctatcgcacaatgggcaccggcgcatccccgtaccaccag
cggcagggaatgcccccaggtcgaggtatgccaatgccagggatggggcctgttcctggc
ccttcatatggttcagggatgcccatgaggcctggcatgcttcagcaagggatggacccc
ttccgaaaacgacttcttcagcagcagcagcagcagcagcagcagcatcacgggatgcat
aaccagagacggggaatcaagcgaaggaaaatggcagacaagatacttcctcaaaggatt
cgagagctggttcctgaatctcaggcctacatggacctccttgcctttgagcgcaagctc
gaccagaccattgctcgcaagcgcatggagatccaggaagctattaaaaagcctataacg
caaaaacgcaagctacgtatctacatctccaacacctatacccccgccaaaccagagggg
gacgaggcagagaaggtggcttcatgggagctgcgcgtggaaggaaagctcctggaagac
cctggaaaacagaagaggaagttttcttccttctttaagagtttggtgattgagctggac
aaagaactgtacggaccagacaaccacctagttgagtggcaccggatgcctacaacccag
gaaacggacgggtttcaggtgaagagacctggagatgtcaatgtgaagtgcactctcatg
ttaatgctggaccaccagcccccgcagtacaagctggacccacgtctggctcgtctcctg
ggcgttcacacccagacccgtgccaacatcatgcaggctctgtggctctacatcaagaac
aacaagctgcaggacagccacgagaaggagcacatcaactgcaaccgctacttcagacag
gtttttaactgtaatcggatgagattctgtgaaatcccgatgaagctggctggcctgttg
cagcatccagaccccatcatcatcaatcacatgatcagccatgccgagtgtgtggacccc
aatgaccagaagaaaacggcttgctatgacattgacgtggaggtggacgaccccttgaag
ggtcagatgagtagcttcctgtcatcgaccaccaatcaacaggagattgctgctctggaa
gtgaagatccacgagaccatcgagtcaataaaccacttgaaaactcagcgggatttcatg
ctgagcttcagtaacaacccccaggagttcattcaggactggctgaaatcccagtgccag
gacctcaagttgatgacggatacggttggaaacccagaagcggagagaagatcagagttt
tacgaggagccttgggcacaggaggctgtcgggagatatgttttctcaaaggtccagcag
cgcagacaagaactggaacaagtgcttggaatccgcctcacctaa
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