Acipenser ruthenus (sterlet): 117434905
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Entry
117434905 CDS
T07327
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03420
Nucleotide excision repair
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117434905 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
117434905 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117434905 (ddb1)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117434905 (ddb1)
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
117434905 (ddb1)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117434905 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117434905 (ddb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Beta_propel
Motif
Other DBs
NCBI-GeneID:
117434905
NCBI-ProteinID:
XP_034762723
LinkDB
All DBs
Position
26:complement(11212876..11229665)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTTKYNACILEYKQCGDSIDILTRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLFGCQVPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAVAPPIIKQSSVVCHHRVDPSGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDL
RVELLGETSIADCLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDASRD
TDDMLVLSFVGQTRVLMLNGEEVEETELPGFVDNLQTFFCGNVAHKQLIQITSGSVRLVT
QESKALVSEWKEPNGKNISVASCNSSQVVVAVGRVLCYLEIQCGELKQISSTEMEHEVAC
LDITPLGDSNGVSSLCAVGLWTDISARILNLPSFNMLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDVHTGVLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLNES
PRRICYQEGSQCFGVLSSRVEVQDASGATAAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEIEVHSLLIVDQHTFEVLHAHQFLQNEFALSLVSCKLGKDPNIYFIVGTAMVHPEE
AEPKQGRIVVFQYCDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEQIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGES
STPTQGSVLLGTVNGMIGLVTSLSESWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLSRPKMQEVVSGLQIDDGSGMKREATVDELIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactacgtggtgacggcccagaagcccaccgcggtcaatgcttgcattacg
ggtcacttcacctccgcggaggacctgaacctgctcattgcgaagaacacgcggctggag
atctacgtggtgactccagaggggcttcggccggtcaaggaggtgggcatgtacggcaag
atcgccgtcatggagctgttcagacccaagggagagagcaaagaccttctcttcatcctg
acgaccaagtacaacgcctgcatcctggagtacaagcagtgtggagacagtatcgatatc
ctgacccgcgcacacgggaacgtgcaggatcgcatcggccggccctcggagacgggaatc
atcgggatcattgacccggagtgccggatgatcgggctgcgtctgtacgacggcctcttc
aaggtgatcccgctggaccgggacaacaaggagctgaaagccttcaacatccgtctggag
gagctgcaggtcattgatgtcaagttcctgttcggctgccaggtgcccacgatctgcttc
gtctaccaggacccccagggacgtcacgtgaagacctacgaggtctccctgcgagagaag
gagttcaacaagggcccctggaagcaggagaacgtggaggcagaggcatccatggtcatc
gcagtcccagagcccttcggaggagccatcatcatcggacaggaatcgatcacctaccac
aacggagacaagtacctggccgtggccccgcccatcatcaagcaaagctcggttgtgtgt
caccaccgtgtggacccaagcggctcacgctacctgctcggggacatggagggcaggctg
ttcatgctgctgctggagaaggaggagcagatggacgggtcggtgaccctgaaggacctg
cgcgtggagctgcttggggagacgtcgatcgcggactgcctgacctacctggataacggc
gtggtgtttgtggggtcccggctcggagactctcagctggtgaagctgaacgtggacagc
aatgagcagggctcatacgtggcagtgatggagaccttcactaacctgggccccatcgtg
gatatgtgtgtggtggacctggagaggcaggggcaggggcagctggtgacctgctccgga
gcgttcaaggaaggatccctgcgaatcatccggaatgggattgggattcatgagcatgcc
agcatcgacctgcccgggatcaaagggctgtggcccctcaggtctgatgcaagccgggac
acagatgacatgctggtgctgtccttcgtggggcagactcgggtgctgatgctgaacgga
gaggaggtggaggagacggagctccctggctttgttgataaccttcagaccttcttctgt
gggaatgtggcgcacaaacagctcattcagatcacgtctggctccgtgcgcctggtcacc
caggagagcaaggccctggtgagcgagtggaaggagcccaatggcaagaacatcagcgtg
gcgtcctgcaacagcagccaggtggtggtggctgtggggagagtgctgtgctacctggag
atacagtgcggagagctcaaacagatcagctccacggagatggagcacgaagtggcctgc
ctggacatcacccctctgggggacagtaacggggtgtcctccctgtgcgcagtgggactg
tggacggacatctccgcacggatcctcaacctgccctccttcaacatgctgcacaaggag
atgctgggaggagaaatcatcccgcgctcgatcctcatgaccaccttcgaggggagtcac
tacctgctgtgcgcgctcggagacggggcgctcttctacttcggactcgacgtccacact
ggtgtgctcagtgatcgtaagaaggtgaccctgggcactcagcccacagtcctgcgcacc
ttccgatcgctctcaaccaccaacgtgttcgcctgctccgaccggcccaccgtcatctac
agcagcaaccacaagctggtgttctccaacgtcaaccttaaggaggtcaactacatgtgc
cccctgaactccgaggggtaccctgacagtctggctcttgccaataacagcaccctgaca
atcggcaccatcgatgagattcagaagctgcacattcgcaccgtgcccctcaacgagtct
ccccggcgtatctgctaccaggaggggtcccagtgttttggggtgctgtccagcagagtg
gaggtgcaggatgccagcggggcgacagcagcggtgcgacccagcgccagcacacaggcc
ctgtccagcagtgtgagctccagtaagctgttcccgagcagcacctccccccacgagact
tcgttcggagaggagatcgaggtgcacagcctgctcatagtggaccagcacacctttgag
gtgctccacgctcaccagttcctgcagaacgagtttgccctgagcctcgtctcctgcaag
ctggggaaggaccccaacatctacttcatcgtggggacagccatggtgcaccccgaggag
gctgagcccaagcaggggcgcatcgtcgtcttccagtactgcgacggtaaactgcagacc
gtagctgagaaggaggtgaagggggctgtgtactccatggtggagttcaatgggaagctg
ctggccagcatcaacagcacagtgcgtctgtacgagtggaccgcggagaaggagctgcgt
accgagtgcaaccactacaacaacattatggctctgtacctgaagaccaagggagacttc
atactggtgggggacctgatgagatcggtgctgctgctggcatacaaacccatggaggga
aacttcgagcagatcgctcgagatttcaaccccaactggatgagcgcggtggagattctc
gacgatgacaacttcctgggggcggagaacgccttcaacctgtttgtgtgtcagaaagac
agtgctgccactacggatgaggagcggcagcacctgcaggaggtgggtctgtttcacctg
ggcgagtttgtgaacgtgttctgccatggctcgctggtgatgcagaacctgggagagagc
tccacccccacgcagggctccgtgctgctcggcaccgtcaacggcatgatcggtctggtg
acctccctgtctgagagctggtacagcctcctcctggacctgcagaacagactcaacaag
gtcatcaagagcgtgggcaagatcgagcactccttctggagatcgttccacacagagcgg
aagacggagcaggcgacaggcttcatcgacggggatctgattgagagtttcctggatctc
agccggcccaagatgcaggaggtggtcagcggcttgcagatcgatgacgggagcgggatg
aagagagaggcgactgtggacgagctcattaaaatcgtggaggagctgaccagaatccac
tag
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integrated database retrieval system