Acipenser ruthenus (sterlet): 117435003
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Entry
117435003 CDS
T07327
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04150
mTOR signaling pathway
arut04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117435003
04150 mTOR signaling pathway
117435003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117435003
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117435003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
cEGF
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117435003
NCBI-ProteinID:
XP_033913713
LinkDB
All DBs
Position
26:7950526..8023013
Genome browser
AA seq
1602 aa
AA seq
DB search
METLFIGLLLYSYFLLVGASPLLLFANRRDVRLVDAGSGKPESAVVVSGLEDAAAVDFVY
SEGLIYWTDVSEEAIKQTLFNQSGNVQTVIVSGLDSPDGLACDWLGKKLYWTDSETNRIE
VANLNGTSRKVLFWQALDQPRAIALDPAHGYMYWTDWGEEPRIERAGMDGSTRKIIVDSD
IYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGTFRQTVVEGTLTHPFALTLSGETLYWT
DWQTRSIHACDKKTGEKKKEILNGIYSPMDIQVLGQERQPDIRTPCDENNGGCTHLCLLS
PREPFYSCACPTGVQLQEDGRTCKPGAEEVLLLARRTDLRRISLDLPDFTDIVLQIDDIR
HAIAIDYDPVEGYVYWTDDEVKAIRRSLIDGTGAETLLTTEVNHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPIRGYMYWTDWGEKPKIERANLDGSD
RLVLLNNSLGWPNGLAIDYAAGKLYWGDAKTDKIEVINIDGTDRRTLLEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKTKGIREIIIDQLPDLMGLKATWVTKAFGTNPCADNNGDCS
HLCFFRPQGPQCACPMGLELLGDMKTCIVPEAFLLFTSRADIRRISLGTHNNDVAIPLPG
VKEASALDFEVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGKNLY
WADTGTNRIELARLDGQYRQVLVWKDLDNPRSLALDPANGFMYWTEWGGKPRIVRAHMDG
ANSITLVDKVGRANGLTIDYTDQRLYWTDLDTCMIESSSMLGLQREVIADDLPHPFGLTQ
YRDYIYWTDWNLRSIERADKTSGQNRTVIQGHLDYVMDILVFHSSRQDGSNECVQNNGQC
AQLCLAVPEGYKCGCASHYTLNSNGRNCSSPSSFLLFSQKSAISRMVLDEQSPDIILPIH
GLRNVRAISYDPLDNVIYWVDGRQNIVKRARDDGSQPFVVVSATNHIQNPEKQPHDLSID
IFSRTVYWTCEATNTINVNRLEGKGIGVVLRGEHDRPRALVMNAERGYMYFTNMQERSAK
IERASLDGTEREVLFTTGLIRPVALAIDNNLGKLFWVDADLKRIESSDLSGANRITLQDS
NILQPTGLTVLGEHLYWIDRQQQMIERVDKINGDKRTRIQGRIVHLTGIHAVEDIDTDEF
SAHPCSRDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACSTGEID
CIPMAWRCDGFLECDDHSDEENCPLCSANQFQCEKGQCIESRLRCNGEIDCQDKSDEQDC
DTICRPNQFRCSTNQCILVKQRCDSFPDCSDGSDEMLCELNTETELQTHSSAIGPVIGII
LSLFVMGAMYFVCQRVVCRRYKGPNGPFPHEYISGTPHLPLNFIAPGSSQHGTFTGISCG
KSMMSSMSLMGSSGSGAPLYDRNHVTGASSSSSSSTKGNFYPQILNPPPSPATDRSLYNT
EMFYSSNSPSTTRSYRPYLMRGIAPPTTPCSTDVCDSDYTTSRWKTNKYYIDLNSDSDPY
PPPPTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggagactttgttcatcgggttactgctttacagttatttccttctggttggtgcgtct
cctctcctgctctttgcaaacaggcgggatgtccggctggtggacgcagggtctgggaaa
ccagagtctgccgtggtggtcagtggtcttgaggatgcagcggcagtggactttgtctac
tcggaggggttgatatactggactgacgtgagtgaagaggccatcaagcaaacccttttc
aatcaatctgggaatgtgcaaactgttattgtttcgggcctggattctcctgatggcctg
gcttgtgactggctgggaaaaaagctgtactggacagactctgaaaccaacaggattgag
gtggccaatctgaatggaacgtcgaggaaagtcctgttctggcaagcccttgaccaacca
agagcaatcgctttggatccagcacacgggtacatgtactggacagattggggggaggag
ccccgcattgagagagctgggatggacggcagcaccaggaaaatcattgtggactctgac
atttactggcccaatggtctgacgatagacctggatgaacagaaactttactgggcagac
gcaaagctgagttttatccacagagcgaacctggatggcacctttcggcaaacggtggtt
gaaggcacgttgacacacccgttcgcactgactctatccggggagactctgtactggaca
gactggcagacccgctcgatacacgcctgtgacaagaaaaccggggagaagaagaaggaa
attctcaatggcatttattctccgatggacatccaggtcctgggccaagagaggcagccc
gacattcgaaccccctgcgatgaaaacaatggaggctgcacccacttatgcctcctgtcc
ccaagagagcctttttacagctgtgcttgtcctactggtgtccagcttcaagaagatggc
aggacctgcaaaccaggcgctgaagaagtattattgctagctagaagaacagacttgcgg
cgtatctctcttgatttgcctgacttcacagacattgtgctgcagattgatgatatccgg
catgccatcgctattgactatgatccagtggagggttatgtgtactggaccgatgacgag
gtcaaagcaatccgcagatcactcatcgatggcactggggctgagaccctgctcaccact
gaagtgaaccaccctgatgggatagcagtggactgggtagcccgaaacctttactggact
gacactgggaccgatcgcatcgaggtgacgagactaaatggcacgtccaggagaatcctc
atatcggaaaatttagacgagccaagagccatcgtactggatcctatccgcggatacatg
tattggaccgactggggcgaaaaaccaaagattgagcgtgccaacttggacggcagtgac
cgccttgtccttctgaataactctttgggttggccaaacgggttagcaatagactatgca
gcagggaagctgtactggggagatgccaaaacagacaaaattgaggtgataaatattgat
ggcactgaccggaggacgcttttagaagataaactgcctcatatatttgggtttacattg
ctgggggattacatctactggactgactggcagagaaggagcattgaacgtgtccacaag
accaaaggcataagagagatcatcatagaccagctgccggatcttatgggcctcaaagca
acatgggtgactaaagcatttggaactaacccttgtgcggacaacaatggagattgcagc
cacctgtgcttcttcaggccacagggtccacagtgtgcctgtccaatgggcctggagctt
ctgggtgacatgaagacctgcattgtgcctgaagccttcctgctgttcaccagcagagcg
gacattcggaggatatctctgggaacacacaataatgacgttgccattcctctccccgga
gtcaaagaggcttctgctctggatttcgaagtgtctgataataggatatattggactgat
gtcagtttgaagactataagccgtgctttcatgaacggcagttctgttgagcatgtgatt
gagtttggactggactaccccgagggcatggcggtggattggatgggaaagaacctttac
tgggccgacacgggcactaaccggatcgagttggcccgtctagatggacagtaccgccag
gtgcttgtgtggaaagacttggacaaccctcgatctctggctcttgacccagctaacggg
ttcatgtactggactgagtgggggggtaaacctaggatagtgagagcgcacatggatggg
gccaacagcatcacactggttgataaagtgggacgagccaatggccttactattgactac
acagaccagaggctctattggacggacttggacacatgcatgattgaatcctccagcatg
ctagggctgcaaagggaagttattgcagatgatctcccccacccgtttgggctcacccag
taccgagactatatctattggaccgactggaacctccgcagcatcgaacgagcagacaag
accagtgggcagaaccgcacggtaatccaggggcatctggactacgttatggatatttta
gtgttccactcctcccgtcaggacggctccaacgaatgtgtgcagaataatgggcagtgt
gcccagctttgtctggctgtacctgagggatacaagtgtggatgtgcttcacattacact
ctcaacagcaatggcaggaactgtagctccccttctagcttcctcctgttcagtcagaaa
tcggcgatcagtcgcatggtgttggacgagcagagcccagacatcatcctccctatccac
ggactgcgcaacgtccgggccatcagctacgaccctctggacaacgtcatttactgggtg
gatgggcggcagaacattgtcaagagagcaagggatgatgggtcacagccatttgtagtg
gtctctgctaccaaccatattcagaacccagagaagcagccccacgatctgagcattgac
attttcagtcggactgtctactggacatgtgaagccaccaacaccatcaacgtgaacaga
ctggaagggaagggcataggagtggtgttgcgtggggagcacgatcgaccaagagccctt
gtgatgaatgcagaaagagggtacatgtacttcacaaacatgcaagagaggtctgctaaa
atagagcgtgcttccctggatggtactgagcgggaggtgctgttcactacaggactcatt
cgacctgtcgctctggcaatcgacaacaacctggggaagctcttctgggtggatgccgat
ctcaaacgcatcgagagcagcgacttgtctggagcaaacaggattactctgcaggattcc
aatatcctccagcccacagggctgacagtgctgggggagcacctgtactggatagacagg
cagcagcagatgattgagcgcgtggacaaaatcaacggggacaagaggaccaggatccag
gggaggatagtgcatctcactgggatccacgcagtggaagacatcgacacagacgagttc
tcggcgcacccatgttcccgtgacaacggaggctgctcacacatctgcattgcgaagggt
gacgggaccccccgctgctcctgcccagtccacctggtgctgctgcagaatctgctcacc
tgtggagaacccccgacgtgttcccctgatcagtttgcctgctccactggggagatcgac
tgtatccccatggcctggcgctgtgacggctttcttgagtgtgacgaccacagcgacgag
gagaactgccctctctgctccgccaaccagttccagtgtgagaagggacagtgcatagag
tcccggctgcgctgcaatggggagatcgactgccaggataagtccgatgagcaggactgt
gacacgatctgccgtccaaaccagttccgctgcagcaccaaccagtgcatcctggtgaaa
cagcggtgcgattccttcccagactgcagcgatggatcagacgagatgctctgtgagttg
aacacagagactgaactccagactcacagcagcgccattgggccggtcatcgggattata
ctgtcgctgttcgtcatgggagccatgtatttcgtgtgccagcgagtggtgtgtcgtcgc
tataaaggccccaatggaccgtttcctcatgaatatatcagcggaactccccacctccct
cttaatttcatagccccaggaagctcccagcatggcactttcactgggatctcgtgtggg
aagtccatgatgagttccatgagtctgatggggagcagtggcagcggtgcccctctgtat
gacaggaaccatgtgactggagcatcatccagcagctcctccagtactaaaggaaacttc
tacccacagattttgaacccacctccgtccccagctaccgaccgatctctgtacaatact
gaaatgttttactcctccaatagtccctcaactaccagatcatacaggccctatttaatg
cgaggcattgcgcctcccaccaccccctgcagcacggacgtgtgtgacagcgactacacc
accagtcgatggaagacaaacaagtactacattgatctgaactcggactcggacccctac
cctccgccccccacccctcggagccagtacatgtctgcagaggagagctgccccccctct
ccctctacagagcgcagctacttccacctgtgtcccccaccgccctccccttgtacagac
tcctcatga
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integrated database retrieval system
