Acipenser ruthenus (sterlet): 117435108
Help
Entry
117435108 CDS
T07327
Name
(RefSeq) interferon regulatory factor 3-like
KO
K09447
interferon regulatory factor 7
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut04623
Cytosolic DNA-sensing pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117435108
04621 NOD-like receptor signaling pathway
117435108
04622 RIG-I-like receptor signaling pathway
117435108
04623 Cytosolic DNA-sensing pathway
117435108
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117435108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117435108
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117435108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Forkhead
Phage_antitermQ
Motif
Other DBs
NCBI-GeneID:
117435108
NCBI-ProteinID:
XP_034762736
LinkDB
All DBs
Position
26:complement(4740931..4753110)
Genome browser
AA seq
435 aa
AA seq
DB search
MQSAAYQKPQFGKWLTDQINSGQYPGLEWVDKDRFRIPWKHNSRKDCNDDDCMIFKAWAI
ASEKFHENQNDKAKWKANFRCALNSLKNFMKTQDKSKESDDPHKVYQILETPINFVNAIK
EDETAQQYVNPQPSPAPIIYQNQHVPQYLQPEDAQQELLNEQLHTLIIGNQYPDDSRWDQ
LPTYGMPAEEYPIEPVPYAPDQVSQNAIPNHIPEQPYYAENELPDLNDLEITIYYRKQTV
LFTQVRGPKVQLHYNKVDPSLGPEGLVCFPGTEQLVDHRQIKYTQKLLNSIQRGLHLEVK
PKGIYGTRLDKCHVYTAHNTPVIEEPSKLPNNREVELLGFQKYLKDLFDFKENKRGSPDY
TIYLCFGEKFPDGKSKDTKLILVKVVPLVCRFWHEMAQREGASSLQSGNISLQLSNNSLY
ELINSYLPDMEMFSV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgctgcttaccaaaagccacagttcggcaagtggctgacagatcagattaac
agtggccagtacccagggctggagtgggtggacaaagaccggttccgcatcccttggaaa
cacaactccaggaaagactgcaatgatgatgactgtatgatattcaaggcttgggctata
gccagtgagaaattccatgaaaatcaaaatgacaaagctaaatggaaagctaacttccgc
tgtgccttaaacagcctgaagaatttcatgaagacacaagacaaatcaaaagagtcggat
gacccacacaaagtctaccagattttagaaacgccaattaactttgtgaacgccattaaa
gaggacgagactgcacagcaatatgtcaacccccagccttccccagctcctatcatatac
cagaaccagcatgtaccacagtacctacagcccgaggatgcacagcaagaattgttgaac
gagcagctgcacacactgattattggaaatcaatacccagacgactcgcggtgggatcag
ctacccacctatggcatgcctgctgaggaatatcccattgagcctgtaccctatgcacca
gatcaagtctctcagaatgcaattccaaatcatatcccagagcagccctactatgccgaa
aatgaactgcctgatttgaacgatttggagattaccatctactaccggaagcagaccgtg
ctgttcacacaggtacgaggccccaaagtacagcttcactacaacaaggtggaccccagc
cttggcccagaagggcttgtgtgcttccccggaacagagcagctcgtggaccacaggcag
attaagtacacccagaagctcctcaacagcatccagagaggcctgcacctggaggtcaaa
ccgaagggcatctacgggacacgactggataagtgccacgtgtacacagcccacaacacg
cctgtgatcgaggagccaagcaagctacccaacaacagggaggtggagcttcttggcttc
caaaaatacttaaaagatttattcgattttaaagaaaacaagcgcggctctccagattat
acaatttacctttgcttcggggagaagtttcctgacgggaaatcgaaggacacaaaatta
atcctagtgaaggtcgttcccctagtctgccgattttggcatgaaatggctcagagagag
ggggcgtcctccttacagagcggcaacatcagcctgcagttatccaacaacagcctgtat
gaattaatcaattcctacttgcctgacatggaaatgttttctgtctaa
DBGET
integrated database retrieval system
