Acipenser ruthenus (sterlet): 117435249
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Entry
117435249 CDS
T07327
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117435249
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117435249
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
117435249
NCBI-ProteinID:
XP_034776675
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Position
4:complement(27410326..27449901)
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AA seq
1112 aa
AA seq
DB search
MPLLNENKKPSCLYECAVNEDGSADIFQVVSHSNIDKLQPLIKMNPNCLRSVDSSNSSPL
HDAAGGGRIQLIKEIVNTTGSDGLNVTDNKGNTPLHLAVKYKQSESCRTLLELGADPNIL
NANQFSALHMAVNLRHNDIVEVLLSHNSVNMNLEGDLGNTPVMLACSIDNHEALNLLLTH
GAHLCRQNKLGHFAIHAAAFSCSKKSMEIILKKGEEMGHQIERHINYVDKSGSTPLHLAV
QGGNTEVIKLCISNGAKIDLQQSDKSTALHFACMQGATEAVKLMLSTYNGGQDVVNIVDG
AHQTPLHKATMFDHVELVEYLLMKGANIDSLDCESHSPLLLATTCGAWLTVELLIQKGAN
VKLKDSCGCNFLHLAVQQPKGLKNISEDILQCKDMRELLNDEDNDGCIPLHYACRLGIQE
SVTNMLGLKVSLHLKSKDKKSSLHFAAGFGRFNTCHQLLESMTDSRLLNEGDKKGMTPLH
LAAQNGHIKVVELLLRKGALFLRDYKGWTCLHYAAVEGYTQTMKILLETNIKLIDKADEE
GNTALHLAAREGHASSVSLLLSKGAEISLNKSEASFFHEAIHQGRKEVAFVVIDSERCHE
AITTFKLGSTKKAPELEMIEFLPESFKVSLIIIVLEYKDDVSSQDYCIEYNFQYLQCPMK
NKKLSKEDTLFKCKPLISLNAMVQFNRVELLTHPVCKKYLEMKWLAYGLKAHVLNLAIYS
LGLVPLTILIVNLRPETSVNKTADNGTEVREVTITEALDKHNYFYTACVILVIVMNLYAI
GKEMVQIYQQRWRYLLDYTNSLDWCVAVSSLLFAIPLLCNSQEHWPWQCGAVAVFHSWVN
FLLYMQRFERFGIYVVMFGEILRTLVCIILLFFFLNLAFALAFYALMLEQQTFATPALSI
MQTFAMMVGDIGYQDNFLTPFIRNRLPFPFLTFVFLCWFLLLMPILLINLLIGLAVGDIA
EIQRNACLKRIAMQIDLHTSLEEKLPYWFMKRVDQVKVIVYPNRACRSKFPAFWNGKPES
ITRLNTGHCQSTPLEAEMQIQKYRLKDISMILEKQHNLLKLIIQKMEIVSEADEQDDTEL
FQYGNVKRQQQLHKSKWNYLIKAVHDKQQKSL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcttaatgaaaataagaaaccgagctgtttatatgaatgtgctgtcaatgaa
gatggttcagcggatatattccaagtggtgtctcatagtaatatagacaagctacaacct
ctgataaagatgaaccctaactgcttgaggagtgtagattcatccaattcaagccctttg
catgatgctgctggaggtggacgtattcagttgataaaagaaatcgtaaacacaactggc
tctgacggtttaaatgtaacagataacaaagggaatacacccctgcatttggctgtcaaa
tacaaacagtcagaaagctgtagaactctgcttgaattgggagcggacccaaacatccta
aatgccaaccaattctctgctttgcacatggctgtaaacttaagacacaacgatattgtt
gaggtattactgtctcacaacagtgtaaacatgaacctggaaggagatcttggaaacacc
ccagttatgttggcctgttctatcgacaatcatgaggcgttaaatctcctgctcacacat
ggcgcacatctgtgcagacaaaacaagctgggacattttgccatccatgcagctgctttt
tcatgttcaaaaaaatctatggaaataattctaaaaaaaggagaagagatgggccatcaa
attgagcgccatattaactacgtggacaaatctggtagtaccccccttcacttggctgtc
cagggtgggaacactgaagtgattaaactttgcatatcaaatggtgcaaaaattgatttg
caacagagtgataaatccactgctcttcattttgcttgtatgcaaggagccactgaagct
gtcaaactaatgctgtcaacatacaacggaggacaggatgtggtcaatattgtcgacgga
gctcatcagacaccgttgcataaggccacaatgtttgatcacgttgaactggtggaatac
ctgttgatgaagggtgccaatattgacagccttgactgtgagtcccactcccctcttcta
ctggctacaacttgtggagcctggcttacagttgagcttttaatacagaaaggagcaaat
gtgaagttaaaagactcttgtggctgcaacttcctacacttggctgtccaacagcccaaa
ggactgaagaatatatctgaggacattttacaatgcaaggacatgagggagcttcttaat
gatgaagacaacgatgggtgcattcctcttcattatgcatgcagactaggaatccaagaa
tcagtaactaacatgctgggattgaaggtatcactccatttaaaatcaaaggataagaaa
tcttcactgcatttcgcagctgggtttgggcgtttcaacacctgccaccaattgctggaa
tccatgacagacagcagactacttaatgaaggagacaagaaaggaatgaccccactccat
ctagcagctcagaatggacacatcaaggttgttgaattgttgctaaggaagggtgcttta
ttccttcgtgattataaaggctggacatgcttacattatgctgcagtggaaggctatact
caaacgatgaaaatacttttggaaactaacataaagcttatagataaggctgatgaagaa
gggaacacagcccttcatctagctgcaagggaaggacatgccagttctgtaagccttctg
ttaagtaaaggagcagagatttctctcaacaaaagcgaggcttctttctttcatgaagca
atacatcaagggagaaaggaagtagcatttgtcgtcattgatagtgaaaggtgccatgaa
gcaattacaacgtttaaattgggatctacgaaaaaagcaccggaactggagatgattgaa
ttccttccagaaagttttaaggtaagcctaattataattgtattggagtacaaagatgat
gtcagtagtcaagactactgtattgaatacaatttccaatatcttcagtgtccaatgaag
aataaaaagttgtcaaaagaagatacactgtttaagtgtaagcctcttatttcactgaat
gccatggtacagtttaaccgcgttgagcttttgacccaccctgtctgcaagaaatattta
gaaatgaaatggcttgcctatggactaaaagcccatgttctcaacctggctatctacagt
cttggtctggtgcctctaacaatcctcattgtgaatctgagaccagaaacatctgtgaat
aaaacagcagacaatggaacagaagtgagagaggtgaccattactgaggccctggataag
cataactatttttatacagcctgcgtgattctggttattgtcatgaatctgtatgcaatt
ggtaaagagatggtccaaatataccagcagcgctggagatacttacttgactacaccaat
tctttggactggtgtgtagcagtctcttctcttctctttgctattcccctcttgtgtaac
tctcaggaacactggccatggcaatgtggggccgtcgccgtgtttcactcctgggtcaac
tttctcctttatatgcaaaggtttgaacgttttgggatttacgtagtgatgtttggggag
atcctccgaactcttgtttgtattatcctgctgttctttttcttgaatttggcatttgcc
ctggcgttttatgctctaatgcttgaacagcaaacatttgcaactccagcactttccata
atgcagacttttgctatgatggtgggagacattggttaccaggacaattttcttactcca
ttcataagaaatagattaccttttccatttttaacctttgtatttctctgctggttttta
ctactgatgccaatcctcctcattaacttgctgattggtttagctgttggagatattgct
gagatccagagaaatgcttgcttgaaaaggattgctatgcagattgatctccatactagc
ttggaggaaaagctgccatactggtttatgaaacgagtggatcaggtcaaagttatagtc
tatcctaacagggcctgtaggtcaaagtttcctgccttctggaatggcaagcctgaatca
ataacccggctgaacacaggccattgccagtcaacacctctggaagctgagatgcagata
cagaagtacaggttgaaggatatttcaatgattttggaaaaacagcacaaccttctgaaa
ctcatcattcaaaaaatggaaatagtgtcagaagctgatgagcaagatgacactgaacta
ttccagtacggcaatgtgaagaggcagcagcaactccacaagagcaagtggaattattta
ataaaagcagtgcatgacaaacaacagaagagtctgtaa
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