Acipenser ruthenus (sterlet): 117435344
Help
Entry
117435344 CDS
T07327
Name
(RefSeq) ribonuclease 3-like isoform X2
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117435344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117435344
03009 Ribosome biogenesis [BR:
arut03009
]
117435344
03036 Chromosome and associated proteins [BR:
arut03036
]
117435344
Enzymes [BR:
arut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
117435344
Messenger RNA biogenesis [BR:
arut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
117435344
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
RNase
117435344
Prokaryotic type
rRNA processing factors
117435344
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
117435344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
117435344
NCBI-ProteinID:
XP_033914316
LinkDB
All DBs
Position
4:complement(16190834..16237265)
Genome browser
AA seq
1319 aa
AA seq
DB search
MSFHPGRGCPRGRGASGQRGTPHNYRPQNLRPIAPPQPMPPFHYDPQAAPSPGYSNSGSA
GYMPPRPDFIPYPPPMPPLGQNPTNQCPLRPPFPNPPVRQAFPGPPNFPPPPILIPTKSS
LSGSAASGQSTYHYMMPPPPLPHTPVPPSMPQQMSYQPPYSINYSQPPFPPPNFNAGYQQ
HSSSFNTDQFRHASQYKAEKSQSERRSPERNRRSEEPRHKGYTYGSHGDRHRMDCSGERR
DRGKSPDRRRQESSRHRSDYDRGRTPPRHRSRERSRERHRHRESRRSVSCERQHRKDSKR
PRSRSSSRDRKRPRWEEERERERERERERERERERERERRPESQGSSREKNYTSVKNKEP
EENQVERAEDDREEEELLKPVWIRCTHAENYYSNDPMDQVGDSTIVGTSKLRDLYDRFEE
ELVKRQERAKASRPQWEPPKTKLDDDLDESSSDSECESDGGSSCSSSSSDSDIFDVIAEI
KRKKAHPDRLQEELWYNDRGQMNDGPLCKCSAKARRTGIRHSIYPGEEHVKACRLMTNNA
GRLYHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSLFSHTPLTNIPLCRVIRFNIDYT
IHFIEEMAPENYCVKGLELFSSYLFKDILELYDWNLKDGGKEVLSMHQVLLYMLHSNKPL
VPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQFNPDVITFPIIV
HFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVRQVDKQKLTQREEALQKIRQKNT
MRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLKDLDKLIGYVFKERCLL
QLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLG
QDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLA
KKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLEEARQLFGRLLFKNED
LREVWLNYPQHPLQVQEPSTDRQLVETSPVLQKLTEFEETIGVLFTHVRLLARAFTLRTV
GFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEE
LGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFI
LNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGK
GPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERERQESDETEEVRK
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcatcccggccgaggttgtccccgtggaaggggtgcgtctggacagcgtgga
acacctcataattacaggccacagaatctcagaccaattgcacctccgcagcccatgcct
ccttttcattatgatccacaagctgctccctcccctggctattctaactctggtagtgca
ggttacatgcctcccagacctgattttataccttatccacccccaatgcccccactggga
cagaatcctacaaaccagtgcccattgagacccccgtttcctaaccctccagttagacaa
gccttcccagggccccctaactttcctccccctccaatcctaatccctaccaagagctca
ttgtctggatcagcagcttcaggtcaaagcacctatcattacatgatgcctcctccacca
ttaccacacacccctgttccaccctccatgccacagcaaatgagctaccagcccccttat
tccattaactattcccagccaccctttcctccacccaattttaatgccggatatcaacag
cactccagctctttcaacaccgatcagttcagacatgcaagtcagtacaaagctgagaag
tcgcagagtgagcgaaggtcgccagaaagaaaccggcgctccgaggagcccaggcacaag
gggtacacctatggaagccatggtgacaggcacaggatggactgttctggagaacggcgg
gatcgtggaaagagcccagacaggaggaggcaggaaagtagccgtcacagatcagactat
gaccgaggcagaacaccacctcgccacagaagtcgggagcgaagcagggaaaggcatcga
cacagggagagcagacggtctgtgtcttgtgaaaggcaacacagaaaagactccaagaga
ccaaggagtcgttcgagcagtcgggataggaagcggcctcgctgggaagaggagagggag
agggagagggagagggagagggagagggagagggagagggagagggagagggagaggagg
ccagagagccagggctcaagtagagagaagaactacacttctgtgaaaaacaaagaacca
gaagagaatcaagtagaaagagctgaagatgatcgagaagaggaagagcttcttaagccg
gtgtggattcgctgtacccatgctgagaattactactcgaatgaccctatggatcaagtg
ggtgactctaccattgttggcacaagtaaactgcgagatctatatgacagatttgaagag
gagttggtgaagagacaagaaagagccaaagcatcaagacctcaatgggaaccaccaaag
accaagttagatgatgatctagatgagagttcaagtgactctgaatgcgagtcggatgga
ggaagcagctgcagcagcagtagttcagactcggacatcttcgatgtcattgcagaaatc
aaacgcaaaaaggcacacccggaccgcctgcaggaggaactctggtacaatgatcgcggc
cagatgaatgatgggccattgtgcaagtgcagtgccaaagccaggcggactggaatccga
cacagcatttatccaggggaagagcatgttaaagcgtgtcgtctaatgacaaacaatgca
ggaagactgtaccactacagaattacagtgtccccacctaccaacttcttaactgaccga
cctactgtaatagaatatgatgatcatgagtacatctttgaaggattctctttgttttca
cacactccgcttactaatattccattatgcagagtgatccgttttaacatagattacacc
attcattttattgaagaaatggcaccagagaattactgtgtaaaaggactggagctgttt
tcatcttatttatttaaagatatcttggagctgtacgactggaatcttaaggacggtggg
aaggaggtgctgtccatgcaccaggtgctcctgtacatgctgcacagcaacaaaccgctg
gttcctgaagaagagattgccaacatgctgcagtgggaggagttggagtggcagaaatat
gcagaggaatgtaaaggaatgatcgtcaccagtcctggcatgaaacccagctctgttcgc
attgaccaattggaccgggagcagtttaacccagatgtcattacctttcctataattgtg
cactttgggataagaccagcgcaactgagctatgccggtgacccacagtaccagaagtta
tggaagagctatgtgaaactacgccatctgctggccaacagtccaaaagtcagacaagtg
gacaaacagaagctaacacaaagagaggaagctcttcagaagatcagacagaaaaacacg
atgcgacgagaggtgactgtggaactgagtagccaggggttctggaaaacaggcatccga
tctgatgtttgccagcatgcaatgatgttaccggtccttacacaccacattcgctaccat
caatgccttaaggatttggacaagttgataggatacgtgttcaaggagcgctgtcttctg
cagctggccatgacccatccaagtcatcacttgaactttggcatgaacccagaccatgcc
agaaactctctttcgaactgtggtattcggcagcccaagtatggagatagaaaagtccat
cacatgtacatgagaaaaaaaggtataaacacattaataaatataatgtcgcggcttggc
caggatgacccatcaccttctagaataaatcataatgagcgcctggagtttcttggtgat
gccgttgtggagttcttaacaagtgtccacctctattatttgtttccgagccttgaagaa
ggaggcttagctacgtatcgtacagctattgttcagaatcagcatcttgccatgctagct
aagaagctggagctggaccggttcatgctttacgcacatggacctgatctgtgccgagag
tctgatctgcggcatgctatggccaactgctttgaagcacttataggagcagtatacttg
gagggtggtttagaggaggccagacagctgtttggacgtttgctgtttaagaatgaggac
ctgcgggaagtatggcttaattacccgcaacatccattgcaagtgcaggagccaagcact
gatagacaacttgttgagacctctccagtcttacaaaagctgacggaatttgaagaaaca
attggagtgctttttacccatgttcgtctcttggctcgcgctttcacgttgcgtacagtg
ggatttaatcatctgacgcttggccacaatcagaggatggaattcttgggtgactcaata
atgcaattggttgccacagagtacttgttcatccatttcccagaccatcatgaagggcat
ttaacgttgctgagaagttcattggtaaataacaggacccaagccaaagttgcagaagaa
ttgggcatgcaggagtttgcaatcacaaatgacaaaacaaagagaccagtagctctaagg
acaaagactctagcagatcttttagaatcttttattgctgcactgtacattgacaaggac
ttggagtatgtgcataccttcatgaatgtttgttttttcccaaggttaaaggagttcata
cttaatcaggactggaatgaccccaaatcccagctccaacagtgttgtttgaccctcaga
acggaaggaaaggaaccagatattccactttacaagactttacagactgtgggtccatca
catgctagaacatacactgttgctgtttactttaaaggcgaaaggattggatgtgggaaa
ggaccaagtattcagcaagcagaaatgggagctgcaatggatgcccttgaaaaatataac
tttccccagatggctcaccagaagcgtttcattgaacggaagtacagacaggagctaaaa
gaaatgagacgggaacgggaacggcaagagtctgatgagactgaggaggtccggaagtaa
DBGET
integrated database retrieval system
