Acipenser ruthenus (sterlet): 117435452
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Entry
117435452 CDS
T07327
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arut03016
]
117435452 (cdkal1)
Enzymes [BR:
arut01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117435452 (cdkal1)
Transfer RNA biogenesis [BR:
arut03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117435452 (cdkal1)
Prokaryotic type
Methylthiotransferases
117435452 (cdkal1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
117435452
NCBI-ProteinID:
XP_033914499
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Position
4:77869220..78299503
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AA seq
565 aa
AA seq
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MQAACDSVLDDIEDMVSAQDPKPHDRQFARKNIVPRASKRRQQQTEDPQADSVIPGTQKI
WMRTWGCSHNNSDGEYMAGQLAAYGYKMTENPSEADLWLLNSCTVKNPAEDHFRNSIKKA
QEQDKKVVVAGCVPQAQPRMEYLKGLSIIGVQQIDRVVEVVDETIKGHSVRLLGQKKDNG
KRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPAEELVERARQSF
LEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMA
KILNHPRVYAFLHVPVQSASDSVLMDMKREYCVADFRRVVEFLKEKVPGITIATDIICGF
PGETDEDFWETMKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELSQLFHS
YNPYDHKVGERQHVLVTEESFDAQYNVAHNKFYEQVLVPKKPEFKGKMIEVDIYETGKHF
MKGQPVGDANVFTPSIAKPLEKGEVSGLIHEFSAVHQNGINGNAASSSAVLLQQSWRPDG
VTVKVISVGLALLAVIVAYAMEKLG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgcttgtgattcagtcctagatgacattgaggatatggtgtctgcacaagat
cccaaaccacatgaccgtcagtttgcaaggaaaaacattgttcctagagccagcaaaaga
agacaacaacagactgaagacccccaggctgatagtgttatccctggcactcagaagatc
tggatgcggacgtggggctgctcgcacaacaattcagatggggagtacatggctggacag
cttgctgcctatggatacaaaatgacagagaatccatctgaagctgatctgtggctgctg
aacagttgcaccgtgaaaaacccagctgaagaccacttcagaaactcaatcaagaaagct
caagagcaagataaaaaagttgtggtggcaggatgtgtcccccaagctcaaccccgaatg
gaatacctcaaaggcctcagcattattggggtacagcaaatagatcgtgtggttgaggta
gtggatgaaaccattaaaggtcactctgtaagactactgggtcagaaaaaggataatgga
aaacggttggggggagctcgattggatttgccgaagattaggaaaaacccactgatagaa
atcatttccatcaatacaggctgcctgaatgcctgtacctactgcaaaaccaagcatgca
aggggtgacttggcaagctaccctgcagaggagttggtggagagagcaaggcagtctttc
ctggagggtgtctgtgagatatggctgaccagcgaagacactggtgcctatggcagagac
attggcactgacctgccaacgctcctgtggaagctggtagaagtgattcctgagggggcg
atgctgaggctcggcatgacaaaccctccttatattttggagcatctagaggaaatggca
aagatccttaatcatccccgggtgtatgccttccttcatgtacctgtccagtcagcatct
gacagcgttctcatggacatgaaaagagaatactgtgtggcagacttcagacgggttgtc
gaatttttaaaagaaaaggttccaggaattactattgctacagacatcatctgtgggttc
ccgggcgagacagatgaggatttctgggaaacgatgaaactggttgaggaatataaattt
cccagccttttcatcaatcagttttacccacgaccaggcacccctgcggcaaaaatggaa
caggtgccagcccaagtgaaaaaacaaagaacaaaagagctgtcccagttgttccattca
tacaacccttatgatcataaggtcggcgagaggcaacatgttttggtgacagaagaatcc
tttgatgctcagtataacgtggctcacaataaattctacgagcaggttttggtccccaaa
aagcctgagtttaagggcaaaatgatagaggtggatatttatgaaacaggcaaacatttt
atgaagggacagccagtgggtgatgccaatgtcttcactccatccattgccaaaccctta
gagaagggagaagtttctgggcttatccatgaattttcagcagtacatcagaatggcata
aatggaaatgcagcctcaagttctgctgtcttgctgcagcagtcatggagaccggatggc
gtgactgtcaaggtgatctctgtgggtctggctctactagctgttattgttgcctatgcc
atggagaaactcggatga
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